Job Description Q23554 Confidence 100.00% Date Fri May 3 21:43:27 BST 2013 Rank 165 Aligned Residues 243 % Identity 23% Template c3qd2B_ PDB info PDB header:gene regulation Chain: B: PDB Molecule:eukaryotic translation initiation factor 2-alpha kinase 3; PDBTitle: crsytal structure of mouse perk kinase domain Resolution 2.81 Å

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		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		D	Q	I	K	L	G	K	M	L	G	E	G	A	F	G	G	V	Y	K	A	A	F	Y	C	K	G	E	K	R	M	V	A	V	K	V	N	K	G	N	E	K	I	S	T	R	A	M	I	E	D	V	C	K	E	A	R	I	M	R	Q	Y	Q	H	P	N	V	V	C	F	F	G	V	C	V	E	K	E	P	I	.
Query Conservation																																																																																	.
Alig confidence														.								.	.																			.	.	.																																					.
Template Conservation														.								.	.																			.	.	.
Template Sequence		T	D	F	E	P	I	Q	C	M	G	R	G	.	F	G	V	V	F	E	A	.	.	K	N	K	V	D	D	C	N	Y	A	I	K	R	I	R	L	P	N	.	.	.	R	E	L	A	R	E	K	V	M	R	E	V	K	A	L	A	K	L	E	H	P	G	I	V	R	Y	F	N	A	W	L	E	T	P	P	E	K
Template Known Secondary structure														.		S						.	.			T	T	T													S	.	.	.	T	T	T													T	S				T	T	B												S
Template Predicted Secondary structure														.								.	.																			.	.	.
Template SS confidence
		587	.	.	590	.	.	.	.	.	.	.	.		.	600	.	.	.	.	.			.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.				.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660
														215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.			.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.		.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																					.	.																																						.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.																					.	.																																						.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	M	L	V	M	E	L	A	S	Q	G	A	L	D	S	F	L	K	N	E	K	.	.	N	N	V	S	L	R	D	K	L	K	Y	S	F	D	A	S	K	G	L	E	Y	L	H	Q	H	G	C	I	H	R	D	V	A	A	R	N	F	.	L	M	H	K	N	V	V	K
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.																					.	.																																						.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																					.	.																																						.
Template Conservation
Template Sequence		W	Q	E	E	M	D	E	P	K	V	Y	L	Y	I	Q	M	Q	L	C	R	K	E	N	L	K	D	W	M	N	R	R	C	S	L	E	D	R	E	H	G	V	C	L	H	I	F	I	Q	I	A	E	A	V	E	F	L	H	S	K	G	L	M	H	R	D	L	K	P	S	N	I	F	F	T	M	D	D	V	V	K
Template Known Secondary structure																						S	S								T			S	G	G	G	S																						T	T								G	G	G					T	T
Template Predicted Secondary structure
Template SS confidence
		662	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	T	D	F	G	L	S	K	Q	L	S	D	L	A	H	K	Y	K	L	K	D	I	Q	A	K	L	P	I	R	W	L	A	P	E	V	I	V	T	A	T	Y	T	F	K	S	D	V	Y	S	F	G	I	L	L	W	E	I	F	M	D	G	A	I	P	Y	P	G	M	K	L	A	E	V	K	Q	K	V	K	N	G
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.																																							.						.	.
Template Conservation															.	.	.	.	.	.	.	.																																							.						.	.
Template Sequence		V	G	D	F	G	L	V	T	A	M	D	Q	D	.	.	.	.	.	.	.	.	T	H	G	Q	V	T	K	L	Y	M	S	P	E	Q	I	H	G	N	N	Y	S	H	K	V	D	I	F	S	L	G	L	I	L	F	E	L	L	Y	.	S	F	S	T	Q	.	.	M	E	R	V	R	I	I	T	D	V	R	N	L
Template Known Secondary structure						T	T					S			.	.	.	.	.	.	.	.							G	G	G	S												T																S	.						.	.												T	T
Template Predicted Secondary structure															.	.	.	.	.	.	.	.																																							.						.	.
Template SS confidence
		951	.	.	.	.	.	.	.	.	960	.	.	.									.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.		.	.	.	.	.			.	.	.	1010	.	.	.	.	.	.	.	.	.
		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	R	M	D	A	P	D	R	M	P	A	F	V	R	N	I	M	I	S	Q	C	W	P	Q	N	P	E	D	R	G	N	M	N	E	I	R	L
Query Conservation
Alig confidence																		.
Template Conservation																		.
Template Sequence		K	F	P	L	L	F	T	Q	K	Y	P	Q	E	H	M	M	.	V	Q	D	M	L	S	P	S	P	T	E	R	P	E	A	T	D	I	I	E
Template Known Secondary structure																		.							S	S	G	G	G	S
Template Predicted Secondary structure																		.
Template SS confidence
		1036	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.		.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D