Job Description Q23554 Confidence 100.00% Date Fri May 3 21:43:27 BST 2013 Rank 26 Aligned Residues 264 % Identity 25% Template c3qa8A_ PDB info PDB header:immune system, signaling protein Chain: A: PDB Molecule:mgc80376 protein; PDBTitle: crystal structure of inhibitor of kappa b kinase beta Resolution 3.60 Å

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		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure																																																																														.	.	.	.
Query SS confidence																																																																														.	.	.	.
Query Sequence		K	L	G	K	M	L	G	E	G	A	F	G	G	V	Y	K	A	A	F	Y	C	K	G	E	K	R	M	V	A	V	K	V	N	K	G	N	E	K	I	S	T	R	A	M	I	E	D	V	C	K	E	A	R	I	M	R	Q	Y	Q	H	P	N	V	V	C	F	F	G	V	C	V	E	K	E	P	I	.	.	.	.
Query Conservation																																																																														.	.	.	.
Alig confidence																			.	.																		.	.	.																																						.	.	.	.
Template Conservation																			.	.																		.	.	.
Template Sequence		E	M	K	E	R	L	G	T	G	G	F	G	Y	V	L	R	W	.	.	I	H	Q	D	T	G	E	Q	V	A	I	K	Q	C	R	Q	E	.	.	.	L	S	P	K	N	R	E	R	W	C	L	E	I	Q	I	M	K	K	L	N	H	P	N	V	V	S	A	R	E	V	P	D	G	L	Q	K	L	A	P	N	D
Template Known Secondary structure									B		S	S	S	B					.	.			T	T	T	T										S		.	.	.																					B	T	T	B								T	T	T					T	T	S
Template Predicted Secondary structure																			.	.																		.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.			.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.				50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
				215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.			.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.					.	.	280	.	.	.	.	.	.
Predicted Secondary structure		.	.																					.	.																																												.	.	.	.
Query SS confidence		.	.																					.	.																																												.	.	.	.
Query Sequence		.	.	M	L	V	M	E	L	A	S	Q	G	A	L	D	S	F	L	K	N	E	K	.	.	N	N	V	S	L	R	D	K	L	K	Y	S	F	D	A	S	K	G	L	E	Y	L	H	Q	H	G	C	I	H	R	D	V	A	A	R	N	F	L	M	H	K	N	V	.	.	.	.	V	K	I	T	D	F	G	L	S
Query Conservation		.	.																					.	.																																												.	.	.	.
Alig confidence		.	.																					.	.																																												.	.	.	.
Template Conservation
Template Sequence		L	P	L	L	A	M	E	Y	C	E	G	G	D	L	R	K	Y	L	N	Q	F	E	N	C	C	G	L	K	E	G	P	I	R	T	L	L	S	D	I	S	S	A	L	R	Y	L	H	E	N	R	I	I	H	R	D	L	K	P	E	N	I	V	L	Q	P	G	P	Q	R	L	I	H	K	I	I	D	L	G	Y	A
Template Known Secondary structure		S									S	S		B							S	S	S		T	T				S	S																			T	T	B							S	T	T							S	S	S							S
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.		.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
Predicted Secondary structure																																																													.																	.	.	.	.
Query SS confidence																																																													.																	.	.	.	.
Query Sequence		K	Q	L	S	D	L	A	H	K	Y	K	L	K	D	I	Q	A	K	L	P	I	R	W	L	A	P	E	V	I	V	T	A	T	Y	T	F	K	S	D	V	Y	S	F	G	I	L	L	W	E	I	F	M	D	G	A	I	P	Y	P	.	G	M	K	L	A	E	V	K	Q	K	V	K	N	G	Y	R	.	.	.	.
Query Conservation																																																													.																	.	.	.	.
Alig confidence																			.	.	.	.	.																															.							.																	.	.	.	.
Template Conservation																			.	.	.	.	.																															.
Template Sequence		K	E	L	D	Q	G	E	L	C	T	E	F	V	G	T	L	Q	.	.	.	.	.	Y	L	A	P	E	L	L	E	Q	K	K	Y	T	V	T	V	D	Y	W	S	F	G	T	L	A	F	E	C	I	T	.	G	F	R	P	F	L	P	N	W	Q	P	V	Q	W	H	G	K	V	R	I	V	V	Y	D	D	L	T
Template Known Secondary structure			B	T	T	S									S			T	.	.	.	.	.	T		S	S		S	S			S			S	T	T															S	.	S		S	S			S	S						S	S	T	T					S					S
Template Predicted Secondary structure																			.	.	.	.	.																															.
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.						.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.		.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
														362	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.			.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																																.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.																																.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	M	D	A	P	D	R	M	P	A	F	V	R	N	I	M	I	S	Q	C	W	P	Q	N	P	E	D	R	G	N	M	N	.	.	E	I	R	L	A	M	E	S	V	L	D	G	K	V	A	A	S	N	N	R	S	V
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.																																.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.															.																	.	.
Template Conservation																												.
Template Sequence		G	A	V	K	F	S	S	V	L	P	T	P	N	H	L	S	G	I	L	A	G	K	L	E	R	W	.	L	Q	C	M	L	M	W	H	Q	R	T	D	P	Q	N	P	N	V	G	C	F	Q	A	L	D	S	I	L	S	L	K	L	L	S	V	M	N	M	V	S
Template Known Secondary structure		S	S					S	S	S			S					G	G	G								.					S		S	S					T	T					T	T																		S	S	S
Template Predicted Secondary structure																												.
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.		.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D