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Job DescriptionQ23554
Confidence100.00%DateFri May 3 21:43:27 BST 2013
Rank43Aligned Residues250
% Identity26%Templatec3q5iA_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein kinase; PDBTitle: crystal structure of pbanka_031420
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  QDWELRHDQIKLGK. . . . MLGEGAFGGVYKAAFYCKGEKRMVAVKVNKGNEKISTRAMIEDVCKEARIMRQYQHPNVVCF
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Template Sequence  PGMYVRKKEGKIGESYFKVRKLGSYGEVLLC. . KEKNGHSEKAIKVIKKKF. . . . . . . HEEIYNEISLLKSLDHPNIIKL
Template Known Secondary structure  GGGG


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   42.......50.........60.........70.. .......80.........90 .........100.........110..
 
   205....210.........220.........230.........240.........250.........260.........270...... ...280
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Query Sequence  FGVCVEKEPIMLVMELASQGALDSFLKNEKNNVSLRDKLKYSFDASKGLEYLHQHGCIHRDVAARNFLMHKN. . . . VVKI
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Template Sequence  FDVFEDKKYFYLVTEFYEGGELFEQIINRHK. FDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKI
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   131........140.........150.........160. ........170.........180.........190.........200.........
 
   281........290.........300.........310.........320.........330.........340.........350.........360
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Query Sequence  TDFGLSKQLSDLAHKYKLKDIQAKLPIRWLAPEVIVTATYTFKSDVYSFGILLWEIFMDGAIPYPGMKLAEVKQKVKNGY
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Template Sequence  VDFGLSSFFSKDYKLRDRLGTAY. . . . . YIAPEVLKK. KYNEKCDVWSCGVIMYILLC. GYPPFGGQNDQDIIKKVEKGK
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   210.........220.........230.. .......240. ........250.........260. ........270.........280..
 
   361..... ...370.........380.........390......
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Query Sequence  RMDAPD. . . RMPAFVRNIMISQCWPQNPEDRGNMNEIRL
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Template Sequence  YYFDFNDWKNISDEAKEL. IKLMLTYDYNKRCTAEEALN
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   283......290.........300 .........310.........320
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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