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Job DescriptionQ23554
Confidence100.00%DateFri May 3 21:43:27 BST 2013
Rank22Aligned Residues266
% Identity23%Templatec3pfqA_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein kinase c beta type; PDBTitle: crystal structure and allosteric activation of protein kinase c beta2 ii
Resolution4.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   119120.........130.........140.........150.........160.........170.........180.........190...... .
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Query Sequence  PALLLNPINKQDWELRHDQIKLGKMLGEGAFGGVYKAAFYCKGEKRMVAVKVNKGNEKISTRAMIEDVCKEARIMRQY. Q
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Template Sequence  LLSQEEGEYFNVPVPPLTDFNFLMVLGKGSFGKVMLS. . ERKGTDELYAVKILKKD. VVIQDDDVECTMVEKRVLALPGK
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TTGGGT





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   277..280.........290.........300.........310... ......320.........330 .........340.........350...
 
   198.200.........210.........220.........230.........240.........250.........260.........270. .....
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Query Sequence  HPNVVCFFGVCVEKEPIMLVMELASQGALDSFLKNEKNNVSLRDKLKYSFDASKGLEYLHQHGCIHRDVAARNF. LMHKN
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Template Sequence  PPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVG. RFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEG
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   400.........410.........420.........430...... ...440.........450.........460.........470........
 
   277..280.........290.........300.........310.........320.........330.........340.........350......
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Query Sequence  VVKITDFGLSKQLSDLAHKYKLKDIQAKLPIRWLAPEVIVTATYTFKSDVYSFGILLWEIFMDGAIPYPGMKLAEVKQKV
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Template Sequence  HIKIADFGMCKENIWDGVTTKFCGTPD. . . . . YIAPEIIAYQPYGKSVDWWAFGVLLYEMLA. GQAPFEGEDEDELFQSI
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   479480.........490.........500..... ....510.........520.........530..... ....540.........550..
 
   357..360.........370.........380.........390. .....
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Query Sequence  KNGYRMDAPDRMPAFVRNIMISQCWPQNPEDRGNM. . . . . NEIRL
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Template Sequence  ME. HNVAYPKSMSKEAVAI. CKGLMTKHPGKRLGCGPEGERDIKE
Template Known Secondary structure  S.S




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   554. ....560.........570. ........580.........590......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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