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Job DescriptionQ23554
Confidence100.00%DateFri May 3 21:43:27 BST 2013
Rank296Aligned Residues243
% Identity21%Templatec3oz6A_
PDB info PDB header:transferaseChain: A: PDB Molecule:mitogen-activated protein kinase 1, serine/threonine PDBTitle: crystal structure of mapk from cryptosporidium parvum, cgd2_1960
Resolution2.37 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  DQIKLGKMLGEGAFGGVYKAAFYCKGEKRMVAVKVNKGNEKISTRAMIEDVCKEARIMRQYQ. HPNVVCFFGVCVEKE. .
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Template Sequence  RKYELVKKI. . . . . . . VWKS. . IDRRTGEVVAVKKI. . . . FDQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDR
Template Known Secondary structure  TT

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Query Sequence  PIMLVMELASQGALDSFLKNEKNNVSLRDKLKYSFDASKGLEYLHQHGCIHRDVAARNF. LMHKNVVKITDFGLSKQLSD
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Template Sequence  DVYLVFDYMETDLHA. . . VIRANILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVN
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Query Sequence  LAHKYKLKDIQAKL. . . PIRWLAPEVIVTATYTFKSDVYSFGILLWEIFMDGAIPYPGMKLAEVKQKVKNGYRMD. . . . .
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Template Sequence  IRRVTNNIPLSINYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILC. GKPIFPGSSTMNQLERIIGVIDFPSNEDV
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   162.......170.........180.........190.........200.........210. ........220.........230.........240
 
   364.....370.........380.........390......
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . APDRMPAFVRNIMISQCWPQNPEDRGNMNEIRL
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Template Sequence  ESIQSPFAKTMIESLKEKVEKRDIFTKWKNLLLKINPKADCNEEALDL. LDKLLQFNPNKRISANDALK
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Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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