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Job DescriptionQ23554
Confidence100.00%DateFri May 3 21:43:27 BST 2013
Rank210Aligned Residues248
% Identity20%Templatec3lm0A_
PDB info PDB header:transferaseChain: A: PDB Molecule:serine/threonine-protein kinase 17b; PDBTitle: crystal structure of human serine/threonine kinase 17b (stk17b)
Resolution2.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   133......140.........150.........160.........170.........180.........190....... ..200.........210.
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Query Sequence  LRHDQIKLGKMLGEGAFGGVYKAAFYCKGEKRMVAVKVNKGNEKISTRAMIEDVCKEARIMRQYQ. HPNVVCFFGVCVEK
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Template Sequence  FNNFYILTSKELGRGKFAVVRQC. . ISKSTGQEYAAKFLKKRRRGQDC. . RAEILHEIAVLELAKSCPRVINLHEVYENT
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SS..TTT

STT
..TTT
TTB


S
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   28.30.........40.........50 .........60.........70... ......80.........90.........100...
 
   212.......220.........230.. .......240.........250.........260.........270.........280.........290
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Query Sequence  EPIMLVMELASQGALDSFLKN. EKNNVSLRDKLKYSFDASKGLEYLHQHGCIHRDVAARNFLMHKNVVKITDFGLSKQLS
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Template Sequence  SEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKI. . . . . .
Template Known Secondary structure  S

TTGGGGGSGGG
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GGGS
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   104.....110.........120.........130.........140.........150.........160.........170.......
 
   291........300.........310.........320.........330.........340.........350.........360..... ..
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Query Sequence  DLAHKYKLKDIQAKLPIRWLAPEVIVTATYTFKSDVYSFGILLWEIFMDGAIPYPGMKLAEVKQKVKNGYRMDAP. . . DR
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Template Sequence  . . . . VDFGMSRKIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLT. HTSPFVGEDNQETYLNISQVNVDYSEETFSS
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TT
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   178.180.........190.........200.........210.........220. ........230.........240.........250..
 
   368.370.........380.........390......
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Query Sequence  MPAFVRNIMISQCWPQNPEDRGNMNEIRL
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Template Sequence  VSQLATDF. IQSLLVKNPEKRPTAEICLS
Template Known Secondary structure  S
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SSGGGS

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   262....... 270.........280.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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