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Job DescriptionQ23554
Confidence100.00%DateFri May 3 21:43:27 BST 2013
Rank153Aligned Residues233
% Identity23%Templatec3kl8C_
PDB info PDB header:transferase/ transferase inhibitorChain: C: PDB Molecule:calcium/calmodulin dependent protein kinase ii; PDBTitle: camkiintide inhibitor complex
Resolution3.37 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   146...150.........160.........170.........180.........190.........200.........210.........220.....
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Query Sequence  EGAFGGVYKAAFYCKGEKRMVAVKVNKGNEKISTRAMIEDVCKEARIMRQYQHPNVVCFFGVCVEKEPIMLVMELASQGA
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Template Sequence  KEELSVVRRC. . VHKTTGLEFAAKIINTD. . . . . . . . FQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGE
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   16...20..... ....30.........40.. .......50.........60.........70.........80.....
 
   226...230.........240.........250.........260.........270........ .280.........290.........300.
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Query Sequence  LDSFLKNEKNNVSLRDKLKYSFDASKGLEYLHQHGCIHRDVAARNFLMHKNVV. . . . KITDFGLSKQLSDLAHKYKLKDI
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Template Sequence  LFEDIVAREF. YSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGT
Template Known Secondary structure  SS.

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   97..100...... ...110.........120.........130.........140.........150.........160.........170.....
 
   302.......310.........320.........330.........340.........350.........360...... ...370........
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Query Sequence  QAKLPIRWLAPEVIVTATYTFKSDVYSFGILLWEIFMDGAIPYPGMKLAEVKQKVKNGYRMDAPD. . . RMPAFVRNIMIS
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Template Sequence  PG. . . . . YLSPEVLKKDPYSKPVDIWACGVILYILLV. GYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSL. ID
Template Known Secondary structure  TT.....T

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   176. ..180.........190.........200....... ..210.........220.........230.........240...... ..
 
   379380.........390......
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Query Sequence  QCWPQNPEDRGNMNEIRL
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Template Sequence  SMLTVNPKKRITADQALK
Template Known Secondary structure  TTS
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TT
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   249250.........260......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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