Return to main results Retrieve Phyre Job Id

Job DescriptionQ23554
Confidence100.00%DateFri May 3 21:43:27 BST 2013
Rank141Aligned Residues231
% Identity26%Templatec3is5E_
PDB info PDB header:transferaseChain: E: PDB Molecule:calcium-dependent protein kinase; PDBTitle: crystal structure of cdpk kinase domain from toxoplasma gondii,2 tgme49_018720
Resolution2.55 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   135....140.........150.........160.........170.........180.........190.........200.........210....
Predicted Secondary structure 



























Query SS confidence 















































































Query Sequence  HDQIKLGKMLGEGAFGGVYKAAFYCKGEKRMVAVKVNKGNEKISTRAMIEDVCKEARIMRQYQHPNVVCFFGVCVEKEPI
Query Conservation           

 
 

 
             



 
                 
  

  
 




 
 
        
Alig confidence 




















..






















...






























Template Conservation     
 
   

 
 

 

  ..    
    


 
         ...     

  
  
 




 
          
Template Sequence  DDLFIFKRKLGSGAFGDVHLV. . EERSSGLERVIKTINKDRSQVPM. . . EQIEAEIEVLKSLDHPNIIKIFEVFEDYHNM
Template Known Secondary structure 
SS
..TTT

GGGBSS
...T


TTB


SS
Template Predicted Secondary structure 





..





...















Template SS confidence 















































































   132.......140.........150.. .......160.........170..... ....180.........190.........200......
 
   215....220.........230.. .......240.........250.........260.........270.... .....280.......
Predicted Secondary structure 












...




















....










Query SS confidence 

















. . .









































. . . .












Query Sequence  MLVMELASQGALDSFLKN. . . EKNNVSLRDKLKYSFDASKGLEYLHQHGCIHRDVAARNFLMH. . . . KNVVKITDFGLSK
Query Conservation   

 

   
 
   
  ...                
   
  

    





  


  ....    

 




 
Alig confidence 

















...









































....












Template Conservation   

 
      
                                               
              
     
Template Sequence  YIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAE
Template Known Secondary structure 



S
BT



TT


S


GGGSSSSTT






GG
Template Predicted Secondary structure 



















































Template SS confidence 















































































   207..210.........220.........230.........240.........250.........260.........270.........280......
 
   288.290.........300.........310.........320.........330.........340.........350.........360.......
Predicted Secondary structure 











































Query SS confidence 















































































Query Sequence  QLSDLAHKYKLKDIQAKLPIRWLAPEVIVTATYTFKSDVYSFGILLWEIFMDGAIPYPGMKLAEVKQKVKNGYRMDAPDR
Query Conservation                         


          







 
 

 
 
  

           
  
     
  
Alig confidence  ................












.




















.


















.......

Template Conservation  ................        

   .       











 
.
  

              .......  
Template Sequence  . . . . . . . . . . . . . . . . LFKALYMAPEVFK. RDVTFKCDIWSAGVVMYFLLT. GCLPFTGTSLEEVQQKATY. . . . . . . KP
Template Known Secondary structure  ................GB

TT

GGGGG.T


T.SS
SS

SS
.......

Template Predicted Secondary structure  ................









.









.











.......

Template SS confidence 















































































   287..290......... 300.........310.........320 .........330......... 340.
 
   368.370.........380.........390......
Predicted Secondary structure 








Query SS confidence 




























Query Sequence  MPAFVRNIMISQCWPQNPEDRGNMNEIRL
Query Conservation      
  


  
   

  


  

  
Alig confidence 







.



















Template Conservation   
 
  

.
   
  

  


  


 
Template Sequence  LTPQAVDL. LKQMLTKDPERRPSAAQVLH
Template Known Secondary structure 

.T
SSTTSS

T
Template Predicted Secondary structure 

.







Template SS confidence 




























   362....... 370.........380.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D