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Job DescriptionQ23554
Confidence100.00%DateFri May 3 21:43:27 BST 2013
Rank209Aligned Residues263
% Identity26%Templatec3hkoA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calcium/calmodulin-dependent protein kinase with a kinase PDBTitle: crystal structure of a cdpk kinase domain from cryptosporidium parvum,2 cgd7_40
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   135....140.........150.........160.........170.........180.........190.........200.........210....
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Query Sequence  HDQIKLGKMLGEGAFGGVYKAAFYCKGEKRMVAVKVNKGNEKISTRAMIEDVCKEARIMRQYQHPNVVCFFGVCVEKEPI
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Template Sequence  QKKYHLKGAIGQGSYGVVRVA. . IENQTRAIRAIKIMNKNKIRQKD. . VERIKTEVRLMKKLHHPNIARLYEVYEDEQYI
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   7..10.........20....... ..30.........40.........50 .........60.........70.........80..
 
   215....220.........230 .........240.........250.......
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Query Sequence  MLVMELASQGALDSFL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . KNEKNNVSLRDKLKYSFDASKGLEYLH
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Template Sequence  CLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIFRESLDFVQREKLISNIMRQIFSALHYLH
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   86...90.........100.........110.........120.........130.........140.........150.........160.....
 
   258.260.........270...... ...280.........290.........300.........310.........320.........330....
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Query Sequence  QHGCIHRDVAARNFLMHKN. . . VVKITDFGLSKQLSDLAHKYKLKDIQAKLPIRWLAPEVIVTATYTFKSDVYSFGILLW
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Template Sequence  NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGAGTPYFV. . . . . . APEVLNTTNESYGPKCDAWSAGVLLH
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   168.170.........180.........190.........200.........210..... ....220.........230.........240.
 
   335....340.........350.........360 .........370.........380.........390...... ...400.........
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Query Sequence  EIFMDGAIPYPGMKLAEVKQKVKNGY. . . RMDAPDRMPAFVRNIMISQCWPQNPEDRGNMNEIRL. . AMESVLDGKVAAS
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Template Sequence  LLLM. GAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDL. LSNLLNRNVDERFDAMRALQHPWISQFSDKIYKMS
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   250... ......260.........270.........280.........290.. .......300.........310.........320.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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