Job Description Q23554 Confidence 100.00% Date Fri May 3 21:43:27 BST 2013 Rank 248 Aligned Residues 219 % Identity 24% Template c3famA_ PDB info PDB header:transferase Chain: A: PDB Molecule:carbon catabolite-derepressing protein kinase; PDBTitle: crystal structure of the protein kinase domain of yeast amp-2 activated protein kinase snf1 Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		141	.	.	.	.	.		.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		G	K	M	L	G	E	.	G	A	F	G	G	V	Y	K	A	A	F	Y	C	K	G	E	K	R	M	V	A	V	K	V	N	K	G	N	E	K	I	S	T	R	A	M	I	E	D	V	C	K	E	A	R	I	M	R	Q	Y	Q	H	P	N	V	V	C	F	F	G	V	C	V	E	K	E	P	I	M	L	V	M	E
Query Conservation								.
Alig confidence								.										.	.																				.	.	.	.	.	.
Template Conservation																		.	.																				.	.	.	.	.	.
Template Sequence		G	A	H	I	G	N	Y	Q	I	V	K	K	V	K	L	A	.	.	Y	H	T	T	T	G	Q	K	V	A	L	K	I	I	N	K	K	V	M	.	.	.	.	.	.	Q	G	R	I	E	R	E	I	S	Y	L	R	L	L	R	H	P	H	I	I	K	L	Y	D	V	I	K	S	K	D	E	I	I	M	V	I	E
Template Known Secondary structure				B				B		S								.	.			T	T	T											S				.	.	.	.	.	.																	T	T	B										S	S
Template Predicted Secondary structure																		.	.																				.	.	.	.	.	.
Template SS confidence
		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.			.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.							.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.		.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.
Query SS confidence																																																						.
Query Sequence		L	A	S	Q	G	A	L	D	S	F	L	K	N	E	K	N	N	V	S	L	R	D	K	L	K	Y	S	F	D	A	S	K	G	L	E	Y	L	H	Q	H	G	C	I	H	R	D	V	A	A	R	N	F	.	L	M	H	K	N	V	V	K	I	T	D	F	G	L	S	K	Q	L	S	D	L	A	H	K	Y	K	L
Query Conservation																																																						.
Alig confidence															.	.																																						.														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	A	G	N	E	L	F	D	Y	I	V	Q	R	.	.	D	K	M	S	E	Q	E	A	R	R	F	F	Q	Q	I	I	S	A	V	E	Y	C	H	R	H	K	I	V	H	R	D	L	K	P	E	N	L	L	L	D	E	H	L	N	V	K	I	A	D	F	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure													T	S	.	.	S	S																							T	T							S	G	G	G					T	T	S							S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure															.	.																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.			.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	D	I	Q	A	K	L	P	I	R	W	L	A	P	E	V	I	V	T	A	T	Y	T	F	K	S	D	V	Y	S	F	G	I	L	L	W	E	I	F	M	D	G	A	I	P	Y	P	G	M	K	L	A	E	V	K	Q	K	V	K	N	G	Y	R	M	D	A	P	D	R	M	P	A	F	V	R	N	I	M	I	S
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.																															.																					.																.
Template Conservation		.	.	.	.	.	.	.	.	.	.																															.																					.																.
Template Sequence		.	.	.	.	.	.	.	.	.	.	L	S	P	N	Y	A	A	P	E	V	I	S	G	P	E	V	D	V	W	S	C	G	V	I	L	Y	V	M	L	C	.	R	R	L	P	F	D	D	E	S	I	P	V	L	F	K	N	I	S	N	G	.	V	Y	T	L	P	K	F	L	S	P	G	A	A	G	L	.	I	K
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.				T	T									T																	.	S	S		S	S			S	S											T	.						T	T	S								.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																															.																					.																.
Template SS confidence
												198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.		.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.		.	.	250	.	.	.	.	.	.	.	.	.	260	.	.		.	.
		379	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	C	W	P	Q	N	P	E	D	R	G	N	M	N	E	I	R	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	M	L	I	V	N	P	L	N	R	I	S	I	H	E	I	M	Q
Template Known Secondary structure				S		S	S	G	G	G	S							T	T
Template Predicted Secondary structure
Template SS confidence
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D