Job Description Q23554 Confidence 92.75% Date Fri May 3 21:43:27 BST 2013 Rank 447 Aligned Residues 90 % Identity 17% Template c3f2rB_ PDB info PDB header:transferase Chain: B: PDB Molecule:choline kinase alpha; PDBTitle: crystal structure of human choline kinase alpha in complex2 with hemicholinium-3 Resolution 2.35 Å

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		186	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.																																																																.	.	.	.	.
Query SS confidence													.																																																																.	.	.	.	.
Query Sequence		V	C	K	E	A	R	I	M	R	Q	Y	.	Q	H	P	N	V	V	C	F	F	G	V	C	V	E	K	E	P	I	M	L	V	M	E	L	A	S	Q	G	A	L	D	S	F	L	K	N	E	K	N	N	V	S	L	R	D	K	L	K	Y	S	F	D	A	S	K	G	L	E	Y	L	H	Q	H	.	.	.	.	.
Query Conservation													.																																																																.	.	.	.	.
Alig confidence													.															.	.	.	.																					.	.	.	.	.	.	.	.	.																	.	.	.	.	.
Template Conservation																												.	.	.	.																					.	.	.	.	.	.	.	.	.
Template Sequence		M	V	L	E	S	V	M	F	A	I	L	A	E	R	S	L	G	P	K	L	Y	G	I	F	P	Q	.	.	.	.	G	R	L	E	Q	F	I	P	S	R	R	L	D	T	E	E	L	S	L	P	.	.	.	.	.	.	.	.	.	D	I	S	A	E	I	A	E	K	M	A	T	F	H	G	M	K	M	P	F	N
Template Known Secondary structure															T	T	S	S								T	T	.	.	.	.														G	G	G	G	G	S		.	.	.	.	.	.	.	.	.															T				S	S
Template Predicted Secondary structure																												.	.	.	.																					.	.	.	.	.	.	.	.	.
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.					.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.										.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
																																																											260	.	.	.	.	.	.	.	.	.	270	.	.	.								.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	C	I	H	R	D	V	A	A	R	N	F	L	M	.	.	.	.	.	.	.	H	K
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	E	P	K	W	L	F	G	T	M	E	K	Y	L	K	E	V	L	R	I	K	F	T	E	E	S	R	I	K	K	L	H	K	L	L	S	Y	N	L	P	L	E	L	E	N	L	R	S	L	L	E	S	T	P	S	P	V	V	F	C	H	N	D	C	Q	E	G	N	I	L	L	L	E	G	R	E	N	S	E	K
Template Known Secondary structure			S																T	T				S	S												T	T															T	S									S			S	G	G	G					T	T		T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
		276	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	V	V	K	I	T	D	F	G	L	S	K	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	K	L	M	L	I	D	F	E	Y	S	S	Y
Template Known Secondary structure		S								T	T
Template Predicted Secondary structure
Template SS confidence
		324	.	.	.	.	.	330	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D