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Job DescriptionQ23554
Confidence99.93%DateFri May 3 21:43:27 BST 2013
Rank313Aligned Residues184
% Identity16%Templatec3en9B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:o-sialoglycoprotein endopeptidase/protein kinase; PDBTitle: structure of the methanococcus jannaschii kae1-bud32 fusion2 protein
Resolution2.67 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   134.....140.........150.........160.........170.........180... ......190.........200.........
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Query Sequence  RHDQIKLGKMLGEGAFGGVYKAAFYCKGEKRMVAVKVNKGNEKISTRAMI. . . . EDVCKEARIMRQYQHPNVVCFFGVCV
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Template Sequence  PNYRTDMVEVNWIGAEADIKRDSYL. . . . DFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDV
Template Known Secondary structure  TT

GGGS






ST....T


TTS
GGGTT




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   312.......320.........330...... ...340.........350.........360.........370.........380.......
 
   210.........220.........230.........240.........250.........260.........270.........280.........
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Query Sequence  EKEPIMLVMELASQGALDSFLKNEKNNVSLRDKLKYSFDASKGLEYLHQHGCIHRDVAARNFLMHKNVVKITDFGLSKQL
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Template Sequence  DLDNKRIMMSYINGKLAKDVIEDN. . . . . . . . . LDIAYKIGEIVGKLHKNDVIHNDLTTSNFIF. DKDLYIIDFGLGKIS
Template Known Secondary structure  TTTT


SGGGTTTT
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GGG.SSS


TT

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   405....410.........420........ .430.........440.........450......... 460.........470....
 
   290.........300.........310.........320.........330.........340.
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Query Sequence  SDLAHKYKLKDIQAKLPIRWLAPEVIVTATYTFKSDVYSFGILLWEIFMDGA
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Template Sequence  NLDEDKAVDL. . . . . . . . . IVFKKAVLSTHHEKFDEIWERFLEGYKSVY. DR
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TTT
.TT
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   475....480.... .....490.........500.........510.... ..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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