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Job DescriptionQ23554
Confidence100.00%DateFri May 3 21:43:27 BST 2013
Rank220Aligned Residues225
% Identity30%Templatec3efwA_
PDB info PDB header:transferase/inhibitorChain: A: PDB Molecule:serine/threonine-protein kinase 6; PDBTitle: structure of auroraa with pyridyl-pyrimidine urea inhibitor
Resolution2.29 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   136...140.........150.........160.........170.........180.........190.........200.........210.....
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Query Sequence  DQIKLGKMLGEGAFGGVYKAAFYCKGEKRMVAVKVNKGNEKISTRAMIEDVCKEARIMRQYQHPNVVCFFGVCVEKEPIM
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Template Sequence  EDFEIGRPLGKGKFGNVYLA. . REKQSKFILALKVLFKA. QLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVY
Template Known Secondary structure  GGTT..TTT

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   131........140.........150 .........160....... ..170.........180.........190.........200.......
 
   216...220.........230.........240.........250.........260.........270. ........280.........290....
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Query Sequence  LVMELASQGALDSFLKNEKNNVSLRDKLKYSFDASKGLEYLHQHGCIHRDVAARNF. LMHKNVVKITDFGLSKQLSDLAH
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Template Sequence  LILEYAPLGTVYRELQKLSK. FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFL. . . . . . . . . .
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   208.210.........220....... ..230.........240.........250.........260.........270......
 
   295....300.........310.........320.........330.........340.........350.........360.........370....
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Query Sequence  KYKLKDIQAKLPIRWLAPEVIVTATYTFKSDVYSFGILLWEIFMDGAIPYPGMKLAEVKQKVKNGYRMDAPDRMPAFVRN
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Template Sequence  . . . . . . . . . . . . . DYLPPEMI. . . . . . EKVDLWSLGVLCYEFLV. GKPPFEANTYQETYKRISR. VEFTFPDFVTEGARD
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   294.....300. ........310........ .320.........330....... ..340.........350..
 
   375....380.........390......
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Query Sequence  IMISQCWPQNPEDRGNMNEIRL
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Template Sequence  L. ISRLLKHNPSQRPMLREVLE
Template Known Secondary structure  .S
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   359 360.........370.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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