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Job DescriptionQ23554
Confidence100.00%DateFri May 3 21:43:27 BST 2013
Rank44Aligned Residues255
% Identity24%Templatec3c4wB_
PDB info PDB header:transferaseChain: B: PDB Molecule:rhodopsin kinase; PDBTitle: crystal structure of g protein coupled receptor kinase 1 bound to atp2 and magnesium chloride at 2.7a
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   132.......140.........150.........160.........170.........180.........190.........200.........210.
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Query Sequence  ELRHDQIKLGKMLGEGAFGGVYKAAFYCKGEKRMVAVKVNKGNEKISTRAMIEDVCKEARIMRQYQHPNVVCFFGVCVEK
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Template Sequence  PMGEDWFLDFRVLGRGGFGEVFAC. . QMKATGKLYACKKLNKK. RLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETK
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   181........190.........200.... .....210.........220. ........230.........240.........250.......
 
   212.......220.........230.. .......240.........250.........260.........270. ........280.......
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Query Sequence  EPIMLVMELASQGALDSFLKN. . . EKNNVSLRDKLKYSFDASKGLEYLHQHGCIHRDVAARNF. LMHKNVVKITDFGLSK
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Template Sequence  TDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAV
Template Known Secondary structure  S


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   258.260.........270.........280.........290.........300.........310.........320.........330.......
 
   288.290.........300.........310.........320.........330.........340....... ..350.........360...
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Query Sequence  QLSDLAHKYKLKDIQAKLPIRWLAPEVIVTATYTFKSDVYSFGILLWEIFMDGAIPYPGM. . . . KLAEVKQKVKNGYRMD
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Template Sequence  ELKAGQTKTKGYAGT. . . . PGFMAPELLLGEEYDFSVDYFALGVTLYEMIA. ARGPFRARGEKVENKELKQRVLE. QAVT
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   338.340.........350.. .......360.........370.........380.... .....390.........400....... ..410.
 
   364.....370.........380........ .390......
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Query Sequence  APDRMPAFVRNIMISQCWPQNPEDR. . . . . GNMNEIRL
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Template Sequence  YPDKFSPASKDF. CEALLQKDPEKRLGFRDGSCDGLRT
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BTTBSTTGGG
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   412.......420... ......430.........440........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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