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Job DescriptionQ23554
Confidence100.00%DateFri May 3 21:43:27 BST 2013
Rank78Aligned Residues247
% Identity21%Templatec2qg5D_
PDB info PDB header:transferaseChain: D: PDB Molecule:calcium/calmodulin-dependent protein kinase; PDBTitle: cryptosporidium parvum calcium dependent protein kinase cgd7_1840
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   135....140.........150.........160.........170.........180.........190.........200.........210....
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Query Sequence  HDQIKLGKMLGEGAFGGVYKAAFYCKGEKRMVAVKVNKGNEKISTRAMIEDVCKEARIMRQYQHPNVVCFFGVCVEKEPI
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Template Sequence  NQYYTLENTIGRGSWGEVKIA. . VQKGTRIRRAAKKIPKYFVED. . . . VDRFKQEIEIMKSLDHPNIIRLYETFEDNTDI
Template Known Secondary structure  TT..TTT

TTT
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BTTB


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   25....30.........40..... ....50.........60...... ...70.........80.........90........
 
   215....220.........230.........240.........250.........260.........270... ......280.........290
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Query Sequence  MLVMELASQGALDSFLKNEKNNVSLRDKLKYSFDASKGLEYLHQHGCIHRDVAARNFLM. . . . HKNVVKITDFGLSKQLS
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Template Sequence  YLVMELCTGGELFERVVHKRV. FRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK
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SGGGGGTTTSS.

TT



SGGGSSSSTT




TT


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   99100.........110......... 120.........130.........140.........150.........160.........170.......
 
   291........300.........310.........320.........330.........340.........350.........360..... ...
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Query Sequence  DLAHKYKLKDIQAKLPIRWLAPEVIVTATYTFKSDVYSFGILLWEIFMDGAIPYPGMKLAEVKQKVKNGYRMDAP. . DRM
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Template Sequence  PGKMMRTKVGTPY. . . . . YVSPQVLEGL. YGPECDEWSAGVMMYVLLC. GYPPFSAPTDEVMLKIREGTFTFPEKDWLNV
Template Known Secondary structure  TT

B



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   178.180.........190 .........200 .........210......... 220.........230.........240.........250
 
   369370.........380.........390......
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Query Sequence  PAFVRNIMISQCWPQNPEDRGNMNEIRL
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Template Sequence  SPQAESL. IRRLLTKSPKQRITSLQALE
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.S
SSTTTS

TT
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   252...... .260.........270........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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