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Job DescriptionQ23554
Confidence100.00%DateFri May 3 21:43:27 BST 2013
Rank204Aligned Residues227
% Identity22%Templatec2onlD_
PDB info PDB header:transferaseChain: D: PDB Molecule:map kinase-activated protein kinase 2; PDBTitle: crystal structure of the p38a-mapkap kinase 2 heterodimer
Resolution4.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   138.140........ .150.........160.........170.........180.........190...... ...200.........210 .
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Query Sequence  IKLGKMLGEGA. FGGVYKAAFYCKGEKRMVAVKVNKGNEKISTRAMIEDVCKEARIMRQY. QHPNVVCFFGVCVE. . . . K
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Template Sequence  VKSGLQIKKNAIIDDVLQI. . FNKRTQEKFALKMLQDC. . . . . . . . . PKARREVELHWRASQCPHIVRIVDVYENLYAGR
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   48.50.........60...... ...70.........80... ......90.........100.........110......
 
   212.......220.........230...... ...240.........250.........260.........270... ......280......
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Query Sequence  EPIMLVMELASQGALDSFLKNEKNN. VSLRDKLKYSFDASKGLEYLHQHGCIHRDVAARNFLM. . . . HKNVVKITDFGLS
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Template Sequence  KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA
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   132.......140.........150.........160.........170.........180.........190.........200.........210.
 
   287..290.........300.........310.........320.........330.........340.........350.........360......
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Query Sequence  KQLSDLAHKYKLKDIQAKLPIRWLAPEVIVTATYTFKSDVYSFGILLWEIFMDGAIPYPGMKLAEVKQKVKNGYRMDAPD
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Template Sequence  KETTSHNSLTTPCYTPY. . . . . YVAPEVLGPEKYDKSCDMWSLGVIMYILLC. GYPPFYEFP. . . . . . . . . . . . . NPEWS
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   212.......220........ .230.........240.........250........ .260....... ..270..
 
   367..370.........380.........390.....
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Query Sequence  RMPAFVRNIMISQCWPQNPEDRGNMNEIR
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Template Sequence  EVSEEVKML. IRNLLKTEPTQRMTITEFM
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   293......300. ........310.........320
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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