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Job DescriptionQ23554
Confidence100.00%DateFri May 3 21:43:27 BST 2013
Rank158Aligned Residues245
% Identity20%Templatec2j2iB_
PDB info PDB header:transferaseChain: B: PDB Molecule:proto-oncogene serine/threonine-protein kinase pim-1; PDBTitle: crystal structure of the humab pim1 in complex with2 ly333531
Resolution1.9 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   136...140.........150.........160.........170.........180 .........190....... ..200.........210.
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Query Sequence  DQIKLGKMLGEGAFGGVYKAAFYCKGEKRMVAVKVNKGNEKISTR. . AMIEDVCKEARIMRQYQ. . HPNVVCFFGVCVEK
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Template Sequence  SQYQVGPLLGSGGFGSVYSG. . IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP
Template Known Secondary structure  TT..TTTTGGG



TT


SSS
SB


S
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   36...40.........50..... ....60.........70.........80.........90.........100.........110...
 
   212.......220.........230.........240.........250.........260.........270..... ....280.........
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Query Sequence  EPIMLVMELASQGALDSFLKNEKNNVSLRDKLKYSFDASKGLEYLHQHGCIHRDVAARNFLMHK. . NVVKITDFGLSKQL
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Template Sequence  DSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL
Template Known Secondary structure  S

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TT



SGGGTTTT


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   114.....120.........130.........140.........150.........160.........170.........180.........190...
 
   290.........300.........310.........320.........330.........340.........350.........360.........
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Query Sequence  SDLAHKYKLKDIQAKLPIRWLAPEVIVTATYTFKSDVYSFGILLWEIFMDGAIPYPGMKLAEVKQKVKNGYRMDAPDRMP
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Template Sequence  KDTVYTDFDGTRVY. . . . . SPPEWIRYHRYHGRSAAVWSLGILLYDMVC. GDIPFEHDEEIIG. . . . . . . GQVFFRQRVS
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   194.....200....... ..210.........220.........230....... ..240.........250 .........260
 
   370.........380.........390......
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Query Sequence  AFVRNIMISQCWPQNPEDRGNMNEIRL
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Template Sequence  SECQHL. IRWCLALRPSDRPTFEEIQN
Template Known Secondary structure  .T
SSGGGS

T
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   261..... ...270.........280......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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