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Job DescriptionQ23554
Confidence99.96%DateFri May 3 21:43:27 BST 2013
Rank312Aligned Residues190
% Identity20%Templatec2exeA_
PDB info PDB header:transferaseChain: A: PDB Molecule:dual specificity protein kinase clk3; PDBTitle: crystal structure of the phosphorylated clk3
Resolution2.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   188.190.........200.........210.........220.........230.... .....240.........250.........260......
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Query Sequence  KEARIMRQYQHPNVVCFFGVCVEKEPIMLVMELASQGALDSFLKNEK. NNVSLRDKLKYSFDASKGLEYLHQHGCIHRDV
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Template Sequence  LEINVLKKIKEKFLCVL. . . . . . . . . MSDAFELL. GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDL
Template Known Secondary structure  T


B

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B


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BTTTT



TTT



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   200.........210...... ...220.... .....230.........240.........250.........260.........
 
   267..270..... ....280.........290.........300.........310.........320.........330.
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Query Sequence  AARNFLMHK. . . . . . . . . . . . . . . NVVKITDFGLSKQLSDLAHKYKLKDIQAKLPIRWLAPEVIVTATYTFKSDVYSFGI
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Template Sequence  KPENILFVNSEFETLYNEEKSVKNTSIRVADFGSATFDHEHHTTIVATRH. . . . . . . YRPPEVILELGWAQPCDVWSIGC
Template Known Secondary structure 
GGG

B


B



GGG
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S
GG.......G

TT


ST
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   285....290.........300.........310.........320.........330.... .....340.........350.......
 
   332.......340.........350........ .360........
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Query Sequence  LLWEIFMDGAIPYPGMKLAEVKQKVKN. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GYRMDAPDRM
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Template Sequence  ILFEYYR. GFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLE
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S


SS




S
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GGGG
S

S
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   363...... 370.........380.........390.........400.........410.........420.........430.........440.
 
   369370.........380.........390......
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Query Sequence  PAFVRNIMISQCWPQNPEDRGNMNEIRL
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Template Sequence  HVQLFDL. MRRMLEFDPAQRITLAEALL
Template Known Secondary structure  .T
S
TTTS

T
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   442...... .450.........460........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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