Return to main results Retrieve Phyre Job Id

Job DescriptionQ23554
Confidence100.00%DateFri May 3 21:43:27 BST 2013
Rank110Aligned Residues248
% Identity25%Templatec2cgvA_
PDB info PDB header:transferaseChain: A: PDB Molecule:serine/threonine-protein kinase chk1; PDBTitle: identification of chemically diverse chk1 inhibitors by2 receptor-based virtual screening
Resolution2.6 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   136...140.........150.........160.........170.........180.........190.........200.........210.....
Predicted Secondary structure 



























Query SS confidence 















































































Query Sequence  DQIKLGKMLGEGAFGGVYKAAFYCKGEKRMVAVKVNKGNEKISTRAMIEDVCKEARIMRQYQHPNVVCFFGVCVEKEPIM
Query Conservation          

 
 

 
             



 
                 
  

  
 




 
 
         
Alig confidence 



















..



















......































Template Conservation    
     

 
 

 
   ..        



 
      ......     
   
  
 




             
Template Sequence  EDWDLVQTLGEGAYGEVQLA. . VNRVTEEAVAVKIVDMKRCP. . . . . . ENIKKEICINKMLNHENVVKFYGHRREGNIQY
Template Known Secondary structure 
S



SS..TTT

TT


......


TTB


STT
Template Predicted Secondary structure 




..




......










Template SS confidence 















































































   7..10.........20...... ...30.........40...... ...50.........60.........70........
 
   216...220.........230.........240.........250.........260.........270. ........280.........290....
Predicted Secondary structure 






























.



















Query SS confidence 























































.






















Query Sequence  LVMELASQGALDSFLKNEKNNVSLRDKLKYSFDASKGLEYLHQHGCIHRDVAARNF. LMHKNVVKITDFGLSKQLSDLAH
Query Conservation 

 

   
 
   
                  
   
  

    





  

.
      

 




        
Alig confidence 



















.


































.






















Template Conservation   
 
      
         .        
          
             

        

 


 
        
Template Sequence  LFLEYCSGGELFDRIEPDIG. MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR
Template Known Secondary structure 


TTGGGGSBTTTB.

TT
S

SGGG
TT




TT

TT
Template Predicted Secondary structure 













.








































Template SS confidence 















































































   82.......90.........100. ........110.........120.........130.........140.........150.........160
 
   295....300.........310.........320 .........330.........340.........350...... ...360.........370.
Predicted Secondary structure 














.












..











Query SS confidence 

























.



































. .














Query Sequence  KYKLKDIQAKLPIRWLAPEVIVTATY. TFKSDVYSFGILLWEIFMDGAIPYPGMKLAEVKQKV. . KNGYRMDAPDRMPAF
Query Conservation                  


       .   







 
 

 
 
  

           
..  
     
      
Alig confidence 








..














.

















.
















..














Template Conservation           ..      

            





  



  .
  

                          
  
Template Sequence  ERLLNKMCG. . TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA. GELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSA
Template Known Secondary structure 

B
S

S..
GGGS

SSB
.SS
S
SS

TT
TT
TTSTTGGGT
Template Predicted Secondary structure 








..
















.





















Template SS confidence 















































































   161........ 170.........180.........190.........200... ......210.........220.........230.......
 
   372.......380.........390......
Predicted Secondary structure 






Query SS confidence 
























Query Sequence  VRNIMISQCWPQNPEDRGNMNEIRL
Query Conservation 
  


  
   

  


  

  
Alig confidence 



.



















Template Conservation     
.
   
  

  
 
  


 
Template Sequence  PLAL. LHKILVENPSARITIPDIKK
Template Known Secondary structure  .S
SSTTTS

TT
Template Predicted Secondary structure  .







Template SS confidence 
























   238.240. ........250.........260.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D