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Job DescriptionQ23554
Confidence100.00%DateFri May 3 21:43:27 BST 2013
Rank86Aligned Residues240
% Identity28%Templatec2bmcD_
PDB info PDB header:transferaseChain: D: PDB Molecule:serine threonine-protein kinase 6; PDBTitle: aurora-2 t287d t288d complexed with pha-680632
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   130.........140.........150.........160.........170.........180.........190.........200.........
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Query Sequence  DWELRHDQIKLGKMLGEGAFGGVYKAAFYCKGEKRMVAVKVNKGNEKISTRAMIEDVCKEARIMRQYQHPNVVCFFGVCV
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Template Sequence  QWAL. . EDFEIGRPLGKGKFGNVYLA. . REKQSKFILALKVLFKA. QLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH
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   127..130 .........140.........150 .........160....... ..170.........180.........190.........200.
 
   210.........220.........230.........240.........250.........260.........270. ........280........
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Query Sequence  EKEPIMLVMELASQGALDSFLKNEKNNVSLRDKLKYSFDASKGLEYLHQHGCIHRDVAARNF. LMHKNVVKITDFGLSKQ
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Template Sequence  DATRVYLILEYAPLGTVYRELQKLSK. FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS. .
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   202.......210.........220....... ..230.........240.........250.........260.........270........
 
   289290.........300.........310.........320.........330.........340.........350.........360........
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Query Sequence  LSDLAHKYKLKDIQAKLPIRWLAPEVIVTATYTFKSDVYSFGILLWEIFMDGAIPYPGMKLAEVKQKVKNGYRMDAPDRM
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Template Sequence  . . . . . . . . . . . . . . . . VTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLV. GKPPFEANTYQETYKRISRVE. FTFPDFV
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   279280.........290.........300.........310.. .......320.........330... ......340
 
   369370.........380.........390......
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Query Sequence  PAFVRNIMISQCWPQNPEDRGNMNEIRL
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Template Sequence  TEGARDL. ISRLLKHNPSQRPMLREVLE
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   353...... 360.........370.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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