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Job DescriptionQ23554
Confidence100.00%DateFri May 3 21:43:27 BST 2013
Rank93Aligned Residues250
% Identity25%Templatec2bdwB_
PDB info PDB header:transferaseChain: B: PDB Molecule:hypothetical protein k11e8.1d; PDBTitle: crystal structure of the auto-inhibited kinase domain of2 calcium/calmodulin activated kinase ii
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   135....140.........150.........160.........170.........180.........190.........200.........210....
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Query Sequence  HDQIKLGKMLGEGAFGGVYKAAFYCKGEKRMVAVKVNKGNEKISTRAMIEDVCKEARIMRQYQHPNVVCFFGVCVEKEPI
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Template Sequence  SDNYDVKEELGKGAFSVVRRC. . VHKTTGLEFAAKII. . NTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFH
Template Known Secondary structure  TTTTT..TTT

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TTB


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   10.........20.........30 .........40.... .....50.........60.........70.........80.....
 
   215....220.........230.........240.........250.........260.........270...... ...280.........290
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Query Sequence  MLVMELASQGALDSFLKNEKNNVSLRDKLKYSFDASKGLEYLHQHGCIHRDVAARNFLMHKN. . . . VVKITDFGLSKQLS
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Template Sequence  YLVFDLVTGGELFEDIVAREF. YSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN
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S
BTT
S
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TT
B



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TT
B

T
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   86...90.........100...... ...110.........120.........130.........140.........150.........160....
 
   291........300.........310.........320.........330.........340.........350.........360..... ..
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Query Sequence  DLAHKYKLKDIQAKLPIRWLAPEVIVTATYTFKSDVYSFGILLWEIFMDGAIPYPGMKLAEVKQKVKNGYRMDAP. . . DR
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Template Sequence  DSEAWHGFAGTPG. . . . . YLSPEVLKKDPYSKPVDIWACGVILYILLV. GYPPFWDEDQHRLYAQIKAGAYDYPSPEWDT
Template Known Secondary structure  T

B


S
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T

B
T.SS
SS

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TTGGGG
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   166...170........ .180.........190.........200........ .210.........220.........230.........
 
   368.370.........380.........390......
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Query Sequence  MPAFVRNIMISQCWPQNPEDRGNMNEIRL
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Template Sequence  VTPEAKSL. IDSMLTVNPKKRITADQALK
Template Known Secondary structure  S
.S
SSGGGS

TT
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   240....... ..250.........260.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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