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Job DescriptionQ23554
Confidence100.00%DateFri May 3 21:43:27 BST 2013
Rank30Aligned Residues255
% Identity23%Templatec2acxB_
PDB info PDB header:transferaseChain: B: PDB Molecule:g protein-coupled receptor kinase 6; PDBTitle: crystal structure of g protein coupled receptor kinase 6 bound to2 amppnp
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   131........140.........150.........160.........170.........180.........190.........200.........210
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Query Sequence  WELRHDQIKLGKMLGEGAFGGVYKAAFYCKGEKRMVAVKVNKGNEKISTRAMIEDVCKEARIMRQYQHPNVVCFFGVCVE
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Template Sequence  QPVTKNTFRQYRVLGKGGFGEVCAC. . QVRATGKMYACKKLEKK. RIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYET
Template Known Secondary structure  S


GGGTT..TTT

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   179180.........190.........200... ......210.........220 .........230.........240.........250.....
 
   211........220.........230.........240.........250.........260.........270. ........280.........
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Query Sequence  KEPIMLVMELASQGALDSFLKNEKNNVSLRDKLKYSFDASKGLEYLHQHGCIHRDVAARNF. LMHKNVVKITDFGLSKQL
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Template Sequence  KDALCLVLTLMNGGDLKFHIYHMAG. FPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHV
Template Known Secondary structure  SS



S
B



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SGGG
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   256...260.........270.........280 .........290.........300.........310.........320.........330....
 
   290.........300.........310.........320.........330.........340.........350.........360.........
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Query Sequence  SDLAHKYKLKDIQAKLPIRWLAPEVIVTATYTFKSDVYSFGILLWEIFMDGAIPYPGMKLAEVKQKVKNGYRMDAPDRMP
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Template Sequence  PEGQTIKGRVGTVG. . . . . YMAPEVVKNERYTFSPDWWALGCLLYEMIA. GQSPFQQKIKREEVERLVKEVPEEYSERFS
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TT




S
GG.....G

TT
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   337..340.........350 .........360.........370.........380 .........390.........400.........410
 
   370.........380........ .390......
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Query Sequence  AFVRNIMISQCWPQNPEDR. . . . . GNMNEIRL
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Template Sequence  PQARSL. CSQLLCKDPAERLGCRGGSAREVKE
Template Known Secondary structure  .S
SSGGGSTTSSSSTT
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   414..... 420.........430.........440....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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