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Job DescriptionQ23554
Confidence100.00%DateFri May 3 21:43:27 BST 2013
Rank40Aligned Residues252
% Identity21%Templatec1ym7C_
PDB info PDB header:transferaseChain: C: PDB Molecule:beta-adrenergic receptor kinase 1; PDBTitle: g protein-coupled receptor kinase 2 (grk2)
Resolution4.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   133......140.........150.........160.........170.... .....180.........190.........200.........210
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Query Sequence  LRHDQIKLGKMLGEGAFGGVYKAAFYCKGEKRMVAVKVNKGN. . EKISTRAMIEDVCKEARIMRQYQHPNVVCFFGVCVE
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Template Sequence  LTMNDFSVHRIIGRGGFGEVYGC. . RKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHT
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GGG
SSS..TTT

TTSSS

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   186...190.........200........ .210.........220.........230.........240.........250.........260...
 
   211........220.........230.........240.........250.........260.........270. ........280.........
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Query Sequence  KEPIMLVMELASQGALDSFLKNEKNNVSLRDKLKYSFDASKGLEYLHQHGCIHRDVAARNF. LMHKNVVKITDFGLSKQL
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Template Sequence  PDKLSFILDLMNGGDLHYHLSQHGV. FSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDF
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   264.....270.........280........ .290.........300.........310.........320.........330.........340..
 
   290.........300.........310......... 320.........330.........340...... ...350.........360.....
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Query Sequence  SDLAHKYKLKDIQAKLPIRWLAPEVIVTAT. YTFKSDVYSFGILLWEIFMDGAIPYPG. . . MKLAEVKQKVKNGYRMDAP
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Template Sequence  SKKKPHASVGTHG. . . . . . YMAPEVLQKGVAYDSSADWFSLGCMLFKLLR. GHSPFRQHKTKDKHEIDRMTLT. MAVELP
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   343......350..... ....360.........370.........380...... ...390.........400........ .410....
 
   366...370.........380......... 390......
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Query Sequence  DRMPAFVRNIMISQCWPQNPEDRG. . . . . NMNEIRL
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Template Sequence  DSFSPELRSL. LEGLLQRDVNRRLGCLGRGAQEVKE
Template Known Secondary structure  TTS
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SSSTTSTTTSSSS
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   415....420.... .....430.........440.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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