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Job DescriptionQ23554
Confidence100.00%DateFri May 3 21:43:27 BST 2013
Rank3Aligned Residues390
% Identity29%Templatec1y57A_
PDB info PDB header:transferaseChain: A: PDB Molecule:proto-oncogene tyrosine-protein kinase src; PDBTitle: structure of unphosphorylated c-src in complex with an inhibitor
Resolution1.91 Å
Model Dimensions (Å)X:99.172 Y:60.159 Z:53.832

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.........40........ .50.........60.........70.. .....
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Query Sequence  SHRAQKTVEASLRSDGTRKKHQDMDWYHGLLPRADINTLLEN. . . . DGDFLVRTSHIVGQDSAKTVLSVK. . . . . WKGKC
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Template Sequence  STGQTGYIPSNYVAPSDS. . IQAEEWYFGKITRRESERLLLNAENPRGTFLVRESETTKGA. . . YCLSVSDFDNAKGLNV
Template Known Secondary structure  TT

GGGTTS..GGGSTTS

T
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TT

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   125....130.........140.. .......150.........160.........170.........180... ......190.........
 
   78.80.........90... ......100.........110.........120....... ..130.........140.........150
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Query Sequence  HHWQLQEKEDGSIVIE. ERKFESVLDMVTTLRMKRLPVSANCPALLLNPIN. . . . . . KQDWELRHDQIKLGKMLGEGAFG
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Template Sequence  KHYKIRKLDSGGFYITSRTQFNSLQQLVAYYSKHADGLCHRLTTVCPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFG
Template Known Secondary structure 
SSS
SSTTSSS

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B







SS



TTB

GGGTT
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   200.........210.........220.........230.........240.........250.........260.........270.........
 
   151........160.........170.........180.........190.........200.........210.........220.........230
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Query Sequence  GVYKAAFYCKGEKRMVAVKVNKGNEKISTRAMIEDVCKEARIMRQYQHPNVVCFFGVCVEKEPIMLVMELASQGALDSFL
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Template Sequence  EVWMGTWN. . . GTTRVAIKTLKPGTMSP. . . . . EAFLQEAQVMKKLRHEKLVQLYAVVS. EEPIYIVTEYMSKGSLLDFL
Template Known Secondary structure  T...TT
TTSS
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TTB


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TT
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   280....... ..290.........300.... .....310.........320.........330 .........340.........350
 
   231..... ...240.........250.........260.........270. ........280.........290.........300........
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Query Sequence  KNEKNN. VSLRDKLKYSFDASKGLEYLHQHGCIHRDVAARNF. LMHKNVVKITDFGLSKQLSDLAHKYKLKDIQAKLPIR
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Template Sequence  KGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF. . . PIK
Template Known Secondary structure  S

TT
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SGGG
GGG



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   351........360.........370.........380.........390.........400.........410.........420.... ...
 
   309310.........320.........330.........340.........350.........360.........370.........380........
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Query Sequence  WLAPEVIVTATYTFKSDVYSFGILLWEIFMDGAIPYPGMKLAEVKQKVKNGYRMDAPDRMPAFVRNIMISQCWPQNPEDR
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Template Sequence  WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDL. MCQCWRKEPEER
Template Known Secondary structure  GS




TTS

SSTT

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TT

.T
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   428.430.........440.........450.........460.........470.........480.........490.... .....500......
 
   389390.........400.........410....
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Query Sequence  GNMNEIRLAMESVLDGKVAASNNRSV
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Template Sequence  PTFEYLQAFLEDYFTSTEPQYQPGEN
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   507..510.........520.........530..
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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