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Job DescriptionQ23554
Confidence100.00%DateFri May 3 21:43:27 BST 2013
Rank27Aligned Residues248
% Identity23%Templatec1koaA_
PDB info PDB header:kinaseChain: A: PDB Molecule:twitchin; PDBTitle: twitchin kinase fragment (c.elegans), autoregulated protein2 kinase and immunoglobulin domains
Resolution3.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   136...140.........150.........160.........170.........180.........190.........200.........210.....
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Query Sequence  DQIKLGKMLGEGAFGGVYKAAFYCKGEKRMVAVKVNKGNEKISTRAMIEDVCKEARIMRQYQHPNVVCFFGVCVEKEPIM
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Template Sequence  DHYDIHEELGTGAFGVVHRV. . TERATGNNFAAKFV. . . . MTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMV
Template Known Secondary structure  GTTT..TTTT....


ST

TTB

TT
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   5940.........5950......... 5960.........5970... ......5980.........5990.........6000.........6010...
 
   216...220.........230.........240.........250.........260.........270..... ....280.........290..
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Query Sequence  LVMELASQGALDSFLKNEKNNVSLRDKLKYSFDASKGLEYLHQHGCIHRDVAARNFLMHK. . . NVVKITDFGLSKQLSDL
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Template Sequence  MIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK
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S
BT
TTS
B
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GGGSSTTS




TT


TT
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   6014.....6020.........6030.........6040.........6050.........6060.........6070.........6080.........6090...
 
   293......300.........310.........320.........330.........340.........350.........360........ .
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Query Sequence  AHKYKLKDIQAKLPIRWLAPEVIVTATYTFKSDVYSFGILLWEIFMDGAIPYPGMKLAEVKQKVKNGYRMDAPDRM. . . P
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Template Sequence  QSVKVTTGTAE. . . . . FAAPEVAEGKPVGYYTDMWSVGVLSYILLS. GLSPFGGENDDETLRNVKSCDWNMDDSAFSGIS
Template Known Secondary structure  S

S
TT.....T

T

B
.SS
SS

SST


S

GGGGG

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   6094.....6100.... .....6110.........6120.........6130.... .....6140.........6150.........6160.......
 
   370.........380.........390......
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Query Sequence  AFVRNIMISQCWPQNPEDRGNMNEIRL
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Template Sequence  EDGKDF. IRKLLLADPNTRMTIHQALE
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SSGGGS

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   6168.6170... ......6180.........6190...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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