Job Description Q23554 Confidence 99.77% Date Fri May 3 21:43:27 BST 2013 Rank 339 Aligned Residues 98 % Identity 20% Template c1ka6A_ PDB info PDB header:immune system Chain: A: PDB Molecule:sh2 domain protein 1a; PDBTitle: sap/sh2d1a bound to peptide n-py Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.				.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.							.	.	.	.	.
Predicted Secondary structure																								.	.	.																																													.	.	.	.	.	.
Query SS confidence																								.	.	.																																													.	.	.	.	.	.
Query Sequence		H	Q	D	M	D	W	Y	H	G	L	L	P	R	A	D	I	N	T	L	L	E	N	.	.	.	D	G	D	F	L	V	R	T	S	H	I	V	G	Q	D	S	A	K	T	V	L	S	V	K	W	K	G	K	C	H	H	W	Q	L	Q	E	K	E	D	G	S	I	V	I	.	.	.	.	.	.	E	E	R	K	F
Query Conservation																								.	.	.																																													.	.	.	.	.	.
Alig confidence																								.	.	.																.	.	.																											.	.	.	.	.	.
Template Conservation																																										.	.	.
Template Sequence		M	D	A	V	A	V	Y	H	G	K	I	S	R	E	T	G	E	K	L	L	L	A	T	G	L	D	G	S	Y	L	L	R	D	S	E	S	V	P	G	V	.	.	.	Y	C	L	C	V	L	Y	H	G	Y	I	Y	T	Y	R	V	S	Q	T	E	T	G	S	W	S	A	E	T	A	P	G	V	H	K	R	Y	F
Template Known Secondary structure						S	S	B			S																T	T								S	S	S	T	T		.	.	.							S	S	S											T	T	S							S	T	T	S
Template Predicted Secondary structure																																										.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40				.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	S	V	L	D	M	V	T	T	L	R	M	K	R	L	P	V	S	A	N	C	P	A	L	L	L	N	P	I	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	K	I	K	N	L	I	S	A	F	Q	K	P	D	Q	G	I	V	I	P	L	Q	Y	P	V	E	K	K	S	S
Template Known Secondary structure		S	S								T	T	S	S		S	S	S	S	S				S	B			S	S
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D