05/05/2013 02:40:36 : INFO  : Run start: Sun May  5 02:40:36 BST 2013
05/05/2013 02:40:36 : INFO  : Initialised job
05/05/2013 02:40:36 : INFO  : Initialised job:
Sequence
>batch____
MQGKQDSHRAQKTVEASLRSDGTRKKHQDMDWYHGLLPRADINTLLENDGDFLVRTSHIV
GQDSAKTVLSVKWKGKCHHWQLQEKEDGSIVIEERKFESVLDMVTTLRMKRLPVSANCPA
LLLNPINKQDWELRHDQIKLGKMLGEGAFGGVYKAAFYCKGEKRMVAVKVNKGNEKISTR
AMIEDVCKEARIMRQYQHPNVVCFFGVCVEKEPIMLVMELASQGALDSFLKNEKNNVSLR
DKLKYSFDASKGLEYLHQHGCIHRDVAARNFLMHKNVVKITDFGLSKQLSDLAHKYKLKD
IQAKLPIRWLAPEVIVTATYTFKSDVYSFGILLWEIFMDGAIPYPGMKLAEVKQKVKNGY
RMDAPDRMPAFVRNIMISQCWPQNPEDRGNMNEIRLAMESVLDGKVAASNNRSVYYKSS

05/05/2013 02:40:36 : INFO  : Checked sequence
05/05/2013 02:40:37 : INFO  : Finding homologues with PSI-BLAST
05/05/2013 02:40:37 : INFO  : PSI-BLAST 3 iterations
05/05/2013 02:43:17 : INFO  : PSI-BLAST 5 iterations
05/05/2013 02:46:48 : INFO  : Finished PSI-BLAST
05/05/2013 02:46:48 : INFO  : Running Buildali to generate a3m file
05/05/2013 04:35:47 : INFO  : Converting to HMM
05/05/2013 04:36:17 : INFO  : Calibrating HMM
05/05/2013 04:36:26 : INFO  : Searching HMM database
05/05/2013 04:43:54 : INFO  : Finished buildali
05/05/2013 04:43:54 : INFO  : Predicting secondary structure
05/05/2013 04:43:56 : INFO  : Predicted secondary structure (PSI-Pred)
05/05/2013 04:43:56 : INFO  : Predicting Disordered regions
05/05/2013 04:43:56 : INFO  : Predicted Disorder (Disopred)
05/05/2013 04:43:56 : INFO  : Running memsat_svm check
05/05/2013 04:45:23 : INFO  : Globular protein
05/05/2013 04:45:23 : INFO  : Predicted Transmembrane (memsat_svm) ID '45c594d30f101979'
05/05/2013 04:45:23 : INFO  : Initialising fold library search
05/05/2013 04:45:24 : INFO  : Initialised search input
05/05/2013 04:45:24 : INFO  : Building Ensemble models
05/05/2013 04:45:24 : INFO  : Building hh.c2fo0A_.model.1.pdb
05/05/2013 04:45:25 : INFO  : Building hh.c1oplA_.model.2.pdb
05/05/2013 04:45:26 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/45c594d30f101979/hh.c1oplA_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/45c594d30f101979/c1oplA_.2.pdb
05/05/2013 04:45:26 : INFO  : Building hh.c1y57A_.model.3.pdb
05/05/2013 04:45:27 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/45c594d30f101979/hh.c1y57A_.model.3.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/45c594d30f101979/c1y57A_.3.pdb
05/05/2013 04:45:27 : INFO  : Building hh.c1k9aB_.model.4.pdb
05/05/2013 04:45:28 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/45c594d30f101979/hh.c1k9aB_.model.4.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/45c594d30f101979/c1k9aB_.4.pdb
05/05/2013 04:45:28 : INFO  : Building hh.c2h8hA_.model.5.pdb
05/05/2013 04:45:29 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/45c594d30f101979/hh.c2h8hA_.model.5.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/45c594d30f101979/c2h8hA_.5.pdb
05/05/2013 04:45:29 : INFO  : Building hh.c2c0iA_.model.6.pdb
05/05/2013 04:45:30 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/45c594d30f101979/hh.c2c0iA_.model.6.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/45c594d30f101979/c2c0iA_.6.pdb
05/05/2013 04:45:30 : INFO  : Building c2fo0A_.1.pdb
05/05/2013 04:45:31 : INFO  : Building c1oplA_.2.pdb
05/05/2013 04:45:31 : INFO  : Building c1y57A_.3.pdb
05/05/2013 04:45:32 : INFO  : Building c1k9aB_.4.pdb
05/05/2013 04:45:32 : INFO  : Building c2h8hA_.5.pdb
05/05/2013 04:45:33 : INFO  : Building c2c0iA_.6.pdb
05/05/2013 04:45:34 : INFO  : Building c4fl2A_.7.pdb
05/05/2013 04:45:35 : INFO  : Building c2ozoA_.8.pdb
05/05/2013 04:45:35 : INFO  : Building c3cblA_.9.pdb
05/05/2013 04:45:37 : INFO  : Building c2j0kB_.10.pdb
05/05/2013 04:45:38 : INFO  : Building c4im2A_.11.pdb
05/05/2013 04:45:39 : INFO  : Building c3zzwA_.12.pdb
05/05/2013 04:45:40 : INFO  : Building c3qa8H_.13.pdb
05/05/2013 04:45:41 : INFO  : Building c2ivsA_.14.pdb
05/05/2013 04:45:42 : INFO  : Building d1qcfa3.15.pdb
05/05/2013 04:45:42 : INFO  : Building d1opja_.16.pdb
05/05/2013 04:45:43 : INFO  : Building d1u59a_.17.pdb
05/05/2013 04:45:44 : INFO  : Building d1qpca_.18.pdb
05/05/2013 04:45:44 : INFO  : Building d1k2pa_.19.pdb
05/05/2013 04:45:45 : INFO  : Building d1lufa_.20.pdb
05/05/2013 04:46:01 : INFO  : Finished HH model building
05/05/2013 04:46:01 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
05/05/2013 04:46:10 : INFO  : html domain output complete ID '45c594d30f101979'
05/05/2013 06:53:35 : INFO  : Run end  : Sun May  5 06:53:35 BST 2013
