Job Description Q8I4E2 Confidence 98.52% Date Sat Apr 13 13:13:52 BST 2013 Rank 251 Aligned Residues 176 % Identity 9% Template c4avmA_ PDB info PDB header:protein binding Chain: A: PDB Molecule:bridging integrator 2; PDBTitle: crystal structure of the n-bar domain of human bridging2 integrator 2. Resolution 1.91 Å

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		374	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	M	Q	V	E	R	F	Q	R	S	V	K	T	S	E	E	A	M	R	V	M	Q	E	R	M	N	M	F	Q	K	V	F	A	G	P	V	K	Q	N	W	Q	K	M	G	S	A	F	K	T	L	Q	Q	S	F	E	I	D	E	T	V	A	S	R	R	L	T	E	A	L	A	Y	T	A	S	E	Y	H	E	I	G
Query Conservation
Alig confidence																																									.												.	.	.	.	.	.	.	.
Template Conservation																																									.												.	.	.	.	.	.	.	.
Template Sequence		D	E	R	F	E	Q	S	A	S	N	F	Y	Q	Q	Q	A	E	G	H	K	L	Y	K	D	L	K	N	F	L	S	A	V	K	V	M	H	E	S	S	.	K	R	V	S	E	T	L	Q	E	I	Y	.	.	.	.	.	.	.	.	S	S	E	W	D	G	H	E	E	L	K	A	I	V	W	N	N	D	L	L	W
Template Known Secondary structure																																									.											S	.	.	.	.	.	.	.	.		T	T	S	T	T
Template Predicted Secondary structure																																									.												.	.	.	.	.	.	.	.
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.		.	80	.	.	.	.	.	.	.	.	.									90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
		454	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.																	.	.	.	.	.	.	510	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	V	F	D	A	H	T	K	N	D	M	E	P	V	L	E	N	L	Y	S	Y	K	G	T	V	Q	N	V	P	D	I	I	Q	V	H	K	Q	A	V	Q	K	F	R	D	S	E	G	R	L	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	A	E	A	E	K	M	K	Q	R	I	D	A	M
Query Conservation																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.
Template Sequence		E	D	Y	E	E	K	L	A	.	.	.	D	Q	A	V	R	T	M	E	I	Y	V	A	Q	F	S	E	I	K	E	R	I	A	K	R	G	R	K	L	V	D	Y	D	S	A	R	H	H	L	E	A	V	Q	N	A	K	K	K	D	E	A	K	T	A	K	A	E	E	E	F	N	K	A	Q	T	V	F	E	D	L
Template Known Secondary structure										.	.	.			T										T																														T		S	S
Template Predicted Secondary structure										.	.	.
Template SS confidence
		111	.	.	.	.	.	.	.				.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		518	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Y	T	V	I	A	E	V	Q	H	Q	T	A	E	K	V	E	D	M	K	S	T	M	G	T	Y	L	K	K	Q	A	M	F	Y	Q	E	V	A	T	K	L	T	S	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	Q	E	L	L	E	E	L	P	I	L	Y	N	S	R	I	G	C	Y	V	T	I	F	Q	N	I	S	N	L	R	D	V	F	Y	R	E	M	S	K	L	N	H	N	L
Template Known Secondary structure															T
Template Predicted Secondary structure
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D