Job Description Q8I4E2 Confidence 34.18% Date Sat Apr 13 13:13:52 BST 2013 Rank 298 Aligned Residues 186 % Identity 8% Template c3s84B_ PDB info PDB header:transport protein Chain: B: PDB Molecule:apolipoprotein a-iv; PDBTitle: dimeric apoa-iv Resolution 2.40 Å

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		381	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	S	V	K	T	S	E	E	A	M	R	V	M	Q	E	R	M	N	M	F	Q	K	V	F	A	G	P	V	K	Q	N	W	Q	K	M	G	S	A	F	K	T	L	Q	Q	S	F	E	I	D	E	T	V	A	S	R	R	L	T	E	A	L	A	Y	T	A	S	E	Y	H	E	I	G	Q	V	F	D	A	H	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	K	I	G	D	N	L	R	E	L	Q	Q	R	L	E	P	Y	A	D	Q	L	R	T	Q	V	N	T	Q	A	E	Q	L	R	R	Q	L	T	P	Y	A	Q	R	M	E	R	V	L	R	E	N	A	D	S	L	Q	A	S	L	R	P	H	A	D	E	L	K	A	K	I	D	Q	N	V	E	E	L	K	G	R	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
		461	.	.	.	.	.	.	.	.	470	.	.		.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		K	N	D	M	E	P	V	L	E	N	L	Y	.	S	Y	K	G	T	V	Q	N	V	P	D	I	I	Q	V	H	K	Q	A	V	Q	K	F	R	D	S	E	G	R	L	S	S	A	E	A	E	K	M	K	Q	R	I	D	A	M	S	Y	T	V	I	A	E	V	Q	H	Q	T	A	E	K	V	E	D	M	K	S	T
Query Conservation														.
Alig confidence														.
Template Conservation
Template Sequence		T	P	Y	A	D	E	F	K	V	K	I	D	Q	T	V	E	E	L	R	R	S	L	A	P	Y	A	Q	D	T	Q	E	K	L	N	H	Q	L	E	G	L	T	F	Q	M	K	K	N	A	E	E	L	K	A	R	I	S	A	S	A	E	E	L	R	Q	R	L	A	P	L	A	E	D	V	R	G	N	L	R	G	N
Template Known Secondary structure																								G	G	G	S	T	T																																																S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
		540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	G	T	Y	L	K	K	Q	A	M	F	Y	Q	E	V	A	T	K	L	T	S	L	A	A	R	Y	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	E	G	L	Q	K	S	L	A	E	L	G	G	H	L	D	Q	Q	V	E	E	F	R	R	R	V	E
Template Known Secondary structure		S	T	T																								T
Template Predicted Secondary structure
Template SS confidence
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D