Return to main results Retrieve Phyre Job Id

Job DescriptionQ8I4E2
Confidence99.61%DateSat Apr 13 13:13:52 BST 2013
Rank21Aligned Residues90
% Identity26%Templatec3p0cA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:nischarin; PDBTitle: nischarin px-domain
Resolution2.27 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   243......250.........260.........270.........280.........290.........300.........310.........320..
Predicted Secondary structure 
































Query SS confidence 















































































Query Sequence  LKSFIAYSITSSLTNIQRQVSRRYKHFDWLHEQLSAKYVLIPIPPLPEKQVAGRYEEDLIDHRKHILQLWVNKICRHPVL
Query Conservation        
            
 


 

  
   
    
   




 
          

 
   
  

  
  

 
Alig confidence 






































.







































Template Conservation        
 
 
        
 





  
   
     .      
 
          

 
   

 

  

    
Template Sequence  VDTYTVYIIQVTDGSHEWTVKHRYSDFHDLHEKLVAERK. IDKNLLPPKKIIGKNSRSLVEKREKDLEVYLQKLLAAFPG
Template Known Secondary structure  SSSS

SS
TTS.S
TTS






S


S
STS
S
Template Predicted Secondary structure 



.




















Template SS confidence 















































































   27..30.........40.........50.........60..... ....70.........80.........90.........100.....
 
   323......330...
Predicted Secondary structure 



Query SS confidence 










Query Sequence  SQSEVWLHFIS
Query Conservation    
     

 
Alig confidence 










Template Conservation    
     


Template Sequence  VTPRVLAHFLH
Template Known Secondary structure 
Template Predicted Secondary structure 




Template SS confidence 










   106...110......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D