Job Description Q8I4E2 Confidence 99.77% Date Sat Apr 13 13:13:52 BST 2013 Rank 7 Aligned Residues 109 % Identity 30% Template c2i4kA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:sorting nexin-1; PDBTitle: solution structure of the px domain of sorting nexin 1 Resolution UNK Model Dimensions (Å) X:38.856 Y:41.071 Z:30.413

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		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.						.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.			.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure																																.	.	.	.	.																											.	.													.	.	.	.	.
Query SS confidence																																.	.	.	.	.																											.	.													.	.	.	.	.
Query Sequence		Y	Y	T	C	I	V	D	K	P	K	K	E	S	K	L	K	G	L	K	S	F	I	A	Y	S	I	T	S	S	L	.	.	.	.	.	T	N	I	Q	R	Q	V	S	R	R	Y	K	H	F	D	W	L	H	E	Q	L	S	A	K	Y	V	.	.	L	I	P	I	P	P	L	P	E	K	Q	V	.	.	.	.	.
Query Conservation																																.	.	.	.	.																											.	.													.	.	.	.	.
Alig confidence																.	.															.	.	.	.	.																											.	.													.	.	.	.	.
Template Conservation																.	.
Template Sequence		D	L	T	V	G	I	T	D	P	E	K	I	G	D	.	.	G	M	N	A	Y	V	A	Y	K	V	T	T	Q	T	S	L	P	L	F	R	S	K	Q	F	A	V	K	R	R	F	S	D	F	L	G	L	Y	E	K	L	S	E	K	H	S	Q	N	G	F	I	V	P	P	P	P	E	K	S	L	I	G	M	T	K
Template Known Secondary structure		S					B					B				.	.	S	S				B				B						S	S	S	S		S	S				B																	T		S	S	S	S					S	S	S	S			S	S	S	S	S	S
Template Predicted Secondary structure																.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.			.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
							294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	A	G	R	Y	E	E	D	L	I	D	H	R	K	H	I	L	Q	L	W	V	N	K	I	C	R	H	P	V	L	S	Q	S	E	V	W	L	H	F	I	S	C	T	D
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.
Template Conservation
Template Sequence		V	K	V	G	K	E	D	S	S	S	A	E	F	L	E	K	R	R	A	A	L	E	R	Y	L	Q	R	I	V	N	H	P	T	M	L	Q	D	P	D	V	R	E	F	L	E	K	E	E
Template Known Secondary structure						S				S	S	T	T																									S					T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D