Job Description Q8I4E2 Confidence 98.59% Date Sat Apr 13 13:13:52 BST 2013 Rank 250 Aligned Residues 179 % Identity 11% Template c2ficA_ PDB info PDB header:endocytosis/exocytosis, membrane protein Chain: A: PDB Molecule:bridging integrator 1; PDBTitle: the crystal structure of the bar domain from human bin1/amphiphysin ii2 and its implications for molecular recognition Resolution 1.99 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	V	E	R	F	Q	R	S	V	K	T	S	E	E	A	M	R	V	M	Q	E	R	M	N	M	F	Q	K	V	F	A	G	P	V	K	Q	N	W	Q	K	M	G	S	A	F	K	T	L	Q	Q	S	F	E	I	D	E	T	V	A	S	R	R	L	T	E	A	L	A	Y	T	A	S	E	Y	H	E	I	G	Q	V
Query Conservation
Alig confidence																																							.												.	.	.	.	.	.	.	.
Template Conservation																																							.												.	.	.	.	.	.	.	.
Template Sequence		Q	F	E	Q	C	V	Q	N	F	N	K	Q	L	T	E	G	T	R	L	Q	K	D	L	R	T	Y	L	A	S	V	K	A	M	H	E	A	S	.	K	K	L	N	E	C	L	Q	E	V	Y	.	.	.	.	.	.	.	.	E	P	D	W	P	G	R	D	E	A	N	K	I	A	E	N	N	D	L	L	W	M	D
Template Known Secondary structure																																							.												.	.	.	.	.	.	.	.		T	T	S	T	T
Template Predicted Secondary structure																																							.												.	.	.	.	.	.	.	.
Template SS confidence
		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.		90	.	.	.	.	.	.	.	.	.	100									.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
		456	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.										.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.	.	.
Query Sequence		F	D	A	H	T	K	N	D	M	E	P	V	L	E	N	L	Y	S	Y	K	G	T	V	Q	N	V	P	D	I	I	Q	V	H	K	Q	A	V	Q	K	F	R	D	S	E	G	R	L	S	.	.	.	.	.	.	.	.	.	S	A	E	A	E	K	M	K	Q	R	I	D	A	M	S	Y	T	V	I	A	E	V	Q
Query Conservation																																																		.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.																																									.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.
Template Sequence		Y	H	Q	K	L	.	.	.	V	D	Q	A	L	L	T	M	D	T	Y	L	G	Q	F	P	D	I	K	S	R	I	A	K	R	G	R	K	L	V	D	Y	D	S	A	R	H	H	Y	E	S	L	Q	T	K	I	A	K	A	E	E	E	L	I	K	A	Q	K	V	F	E	E	M	N	V	D	L	Q	E	E	L	P
Template Known Secondary structure							.	.	.				T										T
Template Predicted Secondary structure							.	.	.
Template SS confidence
		124	.	.	.	.				.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
		527	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	Q	T	A	E	K	V	E	D	M	K	S	T	M	G	T	Y	L	K	K	Q	A	M	F	Y	Q	E	V	A	T	K	L	T	S	L	A	A	R	Y	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	L	W	N	S	R	V	G	F	Y	V	N	T	F	Q	S	I	A	G	L	E	E	N	F	H	K	E	M	S	K	L	N	Q	N	L	N	D	V	L	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D