Return to main results Retrieve Phyre Job Id

Job DescriptionQ8I4E2
Confidence99.65%DateSat Apr 13 13:13:52 BST 2013
Rank15Aligned Residues111
% Identity17%Templatec2dybA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:neutrophil cytosol factor 4; PDBTitle: the crystal structure of human p40(phox)
Resolution3.15 Å
Model Dimensions (Å)X: Y: Z:

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   222.......230.........240.........250...... ...260.........270.........280.........290.........300
Predicted Secondary structure 

























.























Query SS confidence 


































.











































Query Sequence  PIQQYYTCIVDKPKKESKLKGLKSFIAYSITSSLT. NIQRQVSRRYKHFDWLHEQLSAKYVLIPIPPLPEKQVAGRYEED
Query Conservation                             
       .     
 


 

  
   
    
   




 
         
Alig confidence 
















...














.
























..












.


Template Conservation       
   
   
   ...      

 
 
    
    
 


  
  
   
     .. 

 

 
     .   
Template Sequence  PDDVAISANIADIEEKR. . . GFTSHFVFVIEVKTKGGSKYLIYRRYRQFHALQSKLEERFG. . TLPTLPAKVYVGV. KQE
Template Known Secondary structure 
TTS...SSSTTS
T
..










S
.
Template Predicted Secondary structure 




...









..












.
Template SS confidence 















































































   17..20.........30... ......40.........50.........60.........70.... .....80....... ..90
 
   301........310........ .320.........330........
Predicted Secondary structure 
.







Query SS confidence 

















.



















Query Sequence  LIDHRKHILQLWVNKICR. HPVLSQSEVWLHFISCTDEK
Query Conservation   

 
   
  

  
  .

 
  
     

      
Alig confidence 

















.



















Template Conservation      
   
  

  
      
     
  
      
Template Sequence  IAEMRIPALNAYMKSLLSLPVWVLMDEDVRIFFYQSPYD
Template Known Secondary structure  S
T
S

Template Predicted Secondary structure 












Template SS confidence 






































   101........110.........120.........130.........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D