Phyre 2 alignment of Q8I4E2 with c2csqA

Job Description Q8I4E2
Confidence 99.54% Date Sat Apr 13 13:13:52 BST 2013

Rank 44 Aligned Residues 71

% Identity 21% Template c2csqA_

PDB info PDB header:endocytosis/exocytosis Chain: A: PDB Molecule:rim binding protein 2; PDBTitle: solution structure of the second sh3 domain of human rim-2 binding protein 2

Resolution UNK

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	3	.	.	.	.	.	.	10	.	.	.	.	.								.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.
Query Sequence	Q	V	K	A	E	Y	D	F	Q	S	Q	P	N	.	.	.	.	.	.	.	T	G	E	L	S	I	S	A	G	E	V	L	T	V	I	R	E	N	I	D	G	G	W	I	E	G	R	N	V	R	G	S	V	G	L	F	P	E	S	Y	V	T	P	Y	Q	A	S	R	P	P	P	V	L	P	P	P	L	P	P
Query Conservation														.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.																												.
Template Conservation																																																.
Template Sequence	I	F	V	A	L	F	D	Y	D	P	L	T	M	S	P	N	P	D	A	A	E	E	E	L	P	F	K	E	G	Q	I	I	K	V	Y	G	D	K	D	A	D	G	F	Y	R	G	E	.	T	C	A	R	L	G	L	I	P	C	N	M	V	S	E	I	Q	A	D	D	E	E	M	M	D	Q	S	G	P	S	S
Template Known Secondary structure					S	S		B		T	T	T	T	S	S						T	T	B			B		T	T											T	T							.		T	T							T	T	T	S							S						S			S
Template Predicted Secondary structure																																																.
Template SS confidence
	19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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Phyre2 is part of Genome3D