 |
Job Description | Q20933 | Confidence | 95.57% | Date | Fri May 3 21:32:28 BST 2013 |
Rank | 444 | Aligned Residues | 86 |
% Identity | 26% | Template | c2ckpB_ |
PDB info |
PDB header:transferase | Chain: B: PDB Molecule:choline kinase alpha; |
PDBTitle: crystal structure of human choline kinase alpha-2 in2 complex with adp
|
Resolution | 3.1 Å |
|
 |
  |   |
163 | . | . | . | . | . | . | 170 | . | |
. | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | |
|
|
|
|
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
| . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
| . | . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
Query Sequence |   |
T | E | A | R | L | M | R | G | F | . |
D | H | K | N | V | V | K | C | Y | G | V | A | A | I | D | E | P | L | L | V | V | M | E | L | V | P | G | G | A | L | D | K | Y | L | Q | K | N | S | S | V | Q | W | P | E | K | L | D | I | I | A | Q | V | A | A | G | L | A | Y | I | H | S | K | N | I | I | . |
. |
. |
. |
. |
Query Conservation |   |
  |
|   |   |
|
|   |   |
| . |   |
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|
|   |   |   |   |   | . | . | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
Template Conservation |   |
  |
|   |   |   |   |   |   |
|   |   |   |
|
|   |
|   |
|   |   |   |   |   |   | . | . | . | . |
|   |
|   |
|
|
|   |
|   |   |
|   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . |   |   |   |   |   |
|
|   |   |
|   |   |
|
|   |
|   |   |   |   |   |   |   |   |
Template Sequence |   |
L | E | S | V | M | F | A | I | L | A | E | R | S | L | G | P | K | L | Y | G | I | F | P | Q | . |
. |
. |
. |
G | R | L | E | Q | F | I | P | S | R | R | L | D | T | E | E | L | S | L | P | . |
. |
. |
. |
. |
. |
. |
. |
D | I | S | A | E | I | A | E | K | M | A | T | F | H | G | M | K | M | P | F | N | K | E | P |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | T | T | S | S |
|
|  |  |  |  |  | T | T | . | . | . | . |  |  |  |  |  |
|
|
|  |  |  |
|
| G | G | G | G | G | S |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
|
|
| S | S |
|
| S |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
| . | . | . | . |
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |
|
|
|  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
179 | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | |
|
|
|
. | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | |
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . |
  |
  |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
237 | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 |
Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|  |
Query SS confidence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
H | R | D | I | A | A | R | N | I | L | Y | G | K | G | V | A | K | V | S | D | F | G | L | S |
Query Conservation |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |
|
|
|   |   |
|   |   |   |   |   |   |   |   |
|
|   |
|
|
|
|
|
Alig confidence |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|
|
|
|
|
|
|   |   |   |
|
|
|   |   |   |   |   |
|   |
|
|
|
|
|
|
|
Template Sequence |   |
K | W | L | F | G | T | M | E | K | L | S | Y | N | L | P | L | E | L | E | N | L | R | S | L | L | E | S | T | P | S | P | V | V | F | C | H | N | D | C | Q | E | G | N | I | L | L | L | E | Q | K | L | M | L | I | D | F | E | Y | S |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |
|
|
|
|
|
| S |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
| S |
|
|
| G | G | G |  |  |  |  |
|
|
|  |  |  |
|
|
| T | T |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
247 | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
Phyre2 is part of Genome3D |
|