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Job DescriptionQ20933
Confidence100.00%DateFri May 3 21:32:28 BST 2013
Rank202Aligned Residues226
% Identity27%Templatec2bvaA_
PDB info PDB header:transferaseChain: A: PDB Molecule:p21-activated kinase 4; PDBTitle: crystal structure of the human p21-activated kinase 4
Resolution2.3 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   124.....130.........140.........150.........160.........170.........180.........190.........200...
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Query Sequence  GAFGEVKLGTLKMGSTTVDVAIKVAKLEKVTKEQIKEIITEARLMRGFDHKNVVKCYGVAAIDEPLLVVMELVPGGALDK
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Template Sequence  IKIGIVCIATVRSSGK. . LVAVKKMDL. . . . . . . . . . LFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD
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   325....330.........340 ......... 350.........360.........370.........380.........390..
 
   204.....210.........220.........230.........240..... ....250.........260.........270.........280..
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Query Sequence  YLQKNSSVQWPEKLDIIAQVAAGLAYIHSKNIIHRDIAARNI. LYGKGVAKVSDFGLSRVGTEYQMDPSKRVPIRWLSPE
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Template Sequence  IVTH. TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCA. . QVEVPRRKLVGTPYWMAPE
Template Known Secondary structure  TT.S


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   406... 410.........420.........430.........440.........450.........460... ......470.........480..
 
   283......290.........300.........310.........320.........330 .........340.........350.........360.
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Query Sequence  TIVSFLYTPQTDVFAFSILCWEVIENGAQPYPEMLVVQVHQKVGRDDY. RMPISQKAPAMLADVIKKCWIRDPQQRPTMS
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Template Sequence  LISRLPYGPEVDIWSLGIMVIEMVD. GEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAA
Template Known Secondary structure  TT

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   486...490.........500.........510 .........520.........530.........540.........550.........560....
 
   362...
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Query Sequence  QVVQ
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Template Sequence  ELLK
Template Known Secondary structure  TT
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   565...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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