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Job DescriptionQ20933
Confidence100.00%DateFri May 3 21:32:28 BST 2013
Rank107Aligned Residues235
% Identity26%Templatec2wqmA_
PDB info PDB header:transferaseChain: A: PDB Molecule:serine/threonine-protein kinase nek7; PDBTitle: structure of apo human nek7
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   113......120.........130.........140.........150... ......160.........170.........180.........190.
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Query Sequence  ADITMTKVLGEGAFGEVKLGTLKMGSTTVDVAIKVAKLEKV. TKEQIKEIITEARLMRGFDHKNVVKCYGVAAIDEPLLV
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Template Sequence  ANFRIEKKIGRG. . SEVYRAACLLDGV. . PVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNI
Template Known Secondary structure  GG

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   32.......40... ......50...... ...60.........70.........80.........90.........100.......
 
   192.......200...... ...210.........220.........230.........240..... ....250.........260......
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Query Sequence  VMELVPGGALDKYLQ. . . . KNSSVQWPEKLDIIAQVAAGLAYIHSKNIIHRDIAARNI. LYGKGVAKVSDFGLSRVGTEY
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Template Sequence  VLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDL. . . . . . . . .
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   110.........120.........130.........140.........150.........160.........170.........180
 
   267..270.........280.........290.........300.........310.........320.........330.........340......
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Query Sequence  QMDPSKRVPIRWLSPETIVSFLYTPQTDVFAFSILCWEVIENGAQPYPEMLVVQVHQKVGRDDYRMPISQKAPAMLADVI
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Template Sequence  . . . . . . . . TPYYMSPERIHENGYNFKSDIWSLGCLLYEMAA. LQSPFYM. NLYSLCKKIEQCDYPPLPSDHYSEELRQLV
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   199200.........210.........220.........230. ....... .240.........250.........260........
 
   347..350.........360.........370
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Query Sequence  KKCWIRDPQQRPTMSQVVQMMYEI
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Template Sequence  NMCINPDPEKRPDVTYVYDVAKRM
Template Known Secondary structure  T
SSGGGS

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   272.......280.........290.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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