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Job DescriptionQ20933
Confidence100.00%DateFri May 3 21:32:28 BST 2013
Rank73Aligned Residues247
% Identity27%Templatec2clqA_
PDB info PDB header:transferaseChain: A: PDB Molecule:mitogen-activated protein kinase kinase kinase 5; PDBTitle: structure of mitogen-activated protein kinase kinase kinase2 5
Resolution2.3 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   107..110.........120.........130.........140.........150.........160.........170.........180......
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Query Sequence  SWELNHADITMTKVLGEGAFGEVKLGTLKMGSTTVDVAIKVAKLEKVTKEQIKEIITEARLMRGFDHKNVVKCYGVAAID
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Template Sequence  EYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQV. . RIAIKEIPERDS. . . . . QPLHEEIALHKHLKHKNIVQYLGSFSEN
Template Known Secondary structure 

B
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.....T


TTB

T
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   672.......680.........690.........700.... .....710...... ...720.........730.........740....
 
   187..190.........200......... 210.........220.........230.........240......... 250.........260.
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Query Sequence  EPLLVVMELVPGGALDKYLQKNS. . . SVQWPEKLDIIAQVAAGLAYIHSKNIIHRDIAARNILYGK. . GVAKVSDFGLSR
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Template Sequence  GFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSK
Template Known Secondary structure  T

STT


TT
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SGGGTTT



TTT
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   748.750.........760.........770.........780.........790.........800.........810.........820.......
 
   262.......270.........280........ .290.........300.........310....... ..320.........330........
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Query Sequence  VGTEYQMDPSKRVPIRWLSPETIVSFL. . YTPQTDVFAFSILCWEVIENGAQPYPEML. VVQVHQKVGRDDYRMPISQKA
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Template Sequence  R. . . . LAGETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMAT. GKPPFYELGEPQAAMFKVGMFKVHPEIPESM
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GGG

GGGG
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   828 .830.........840.........850.........860.........870. ........880.........890.........900..
 
   339340.........350.........360.....
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Query Sequence  PAMLADVIKKCWIRDPQQRPTMSQVVQ
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Template Sequence  SAEAKAFILKCFEPDPDKRACANDLLV
Template Known Secondary structure 
TT
SSTTTS

T
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   908.910.........920.........930....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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