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Job DescriptionQ20933
Confidence92.60%DateFri May 3 21:32:28 BST 2013
Rank450Aligned Residues138
% Identity16%Templatec3csvA_
PDB info PDB header:transferaseChain: A: PDB Molecule:aminoglycoside phosphotransferase; PDBTitle: crystal structure of a putative aminoglycoside phosphotransferase2 (yp_614837.1) from silicibacter sp. tm1040 at 2.15 a resolution
Resolution2.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   122.......130.........140.........150.........160.........170.........180.........190.........200.
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Query Sequence  GEGAFGEVKLGTLKMGSTTVDVAIKVAKLEKVTKEQIKEIITEARLMRGFDHKNVVKCYGVAAIDEPLLVVMELVPGGAL
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Template Sequence  GYADWNRTPRYQRLRSPTGAKAVLXDWSPEEGGDTQ. . PFVDLAQYLRNLDIS. APEIYAEEHARG. . LLLIEDLGDALF
Template Known Secondary structure  T
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TT



TTTT

S..TT
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S
B
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   16...20.........30.........40.........50. ........60...... ...70........ .80.........90
 
   202...... .210.........220.........230.
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Query Sequence  DKYLQKN. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . SSVQWPEKLDIIAQVAAGLAYIH
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Template Sequence  TEVINNDPAQEXPLYRAAVDLLIHLHDAQTPELARLDPETLSEXTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQL
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GGGTS





B

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   99100.........110.........120.........130.........140.........150.........160.........170........
 
   232. ......240.........250. ........260....
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Query Sequence  SK. . NIIHRDIAARNILYGKGV. . . . . AKVSDFGLSRVGT
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Template Sequence  EGDXVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLGH
Template Known Secondary structure 
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S

SGGG
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GGGG


TT

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   179180.........190.........200.........210........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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