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Job DescriptionQ20933
Confidence100.00%DateFri May 3 21:32:28 BST 2013
Rank17Aligned Residues252
% Identity21%Templatec3nyoB_
PDB info PDB header:transferaseChain: B: PDB Molecule:g protein-coupled receptor kinase 6; PDBTitle: crystal structure of g protein-coupled receptor kinase 6 in complex2 with amp
Resolution2.92 Å
Model Dimensions (Å)X: Y: Z:

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   110.........120.........130.........140.........150... ......160.........170.........180........
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Query Sequence  LNHADITMTKVLGEGAFGEVKLGTLKMGSTTVDVAIKVAKLEKV. TKEQIKEIITEARLMRGFDHKNVVKCYGVAAIDEP
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Template Sequence  VTKNTFRQYRVLGKGGFGEVCACQVRATGK. . MYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDA
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GGG



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   181........190.........200.........210 .........220.........230.........240.........250........
 
   189190.........200.........210 .........220.........230.........240......... 250.........260.....
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Query Sequence  LLVVMELVPGGALDKYLQKNSS. . VQWPEKLDIIAQVAAGLAYIHSKNIIHRDIAARNILYGK. GVAKVSDFGLSRVGTE
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Template Sequence  LCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPE
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TTTSSSSS

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   259260.........270.........280.........290.........300.........310.........320.........330........
 
   266...270.........280.........290.........300.........310.........320.........330.........340.....
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Query Sequence  YQMDPSKRVPIRWLSPETIVSFLYTPQTDVFAFSILCWEVIENGAQPYPEMLVVQVHQKVGRDDYRMPISQKAPAMLADV
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Template Sequence  GQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIA. GQSPFQKKIKREEVERLVKEV. PEEYSERFSPQARSL
Template Known Secondary structure  T

B



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   339340.........350.........360.........370.........380 .........390.........400. ........410......
 
   346...350........ .360.....
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Query Sequence  IKKCWIRDPQQRP. . . . . TMSQVVQ
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Template Sequence  CSQLLCKDPAERLGCRGGSAREVKE
Template Known Secondary structure  S
S
GGGSTTTTTTT
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   420.........430.........440....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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