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Job DescriptionQ20933
Confidence100.00%DateFri May 3 21:32:28 BST 2013
Rank10Aligned Residues258
% Identity33%Templatec2j0kB_
PDB info PDB header:transferaseChain: B: PDB Molecule:focal adhesion kinase 1; PDBTitle: crystal structure of a fragment of focal adhesion kinase2 containing the ferm and kinase domains.
Resolution3.0 Å
Model Dimensions (Å)X: Y: Z:

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   101........110.........120.........130...... ...140.........150.........160.........170.........
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Query Sequence  NPIGRQSWELNHADITMTKVLGEGAFGEVKLGTLKM. GSTTVDVAIKVAKLEKVTKEQIKEIITEARLMRGFDHKNVVKC
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Template Sequence  TMPSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCT. SDSVREKFLQEALTMRQFDHPHIVKL
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   408.410.........420.........430.........440.........450.........460 .........470.........480......
 
   180.........190.........200......... 210.........220.........230.........240......... 250.......
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Query Sequence  YGVAAIDEPLLVVMELVPGGALDKYLQKNS. SVQWPEKLDIIAQVAAGLAYIHSKNIIHRDIAARNILYGK. GVAKVSDF
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Template Sequence  IGVITEN. PVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDF
Template Known Secondary structure 
SS.S


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SGGGTT


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   487..490... ......500.........510.........520.........530.........540.........550.........560.....
 
   258.260.........270.........280.........290.........300.........310.........320.........330.......
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Query Sequence  GLSRVGTEYQMDPSKRVPIRWLSPETIVSFLYTPQTDVFAFSILCWEVIENGAQPYPEMLVVQVHQKVGRDDYRMPISQK
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Template Sequence  GLSR. . . . . . . . . . . . LPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE. RLPMPPN
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   566... 570.........580.........590.........600.........610.........620..... ....630..
 
   338.340.........350.........360.........370...
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Query Sequence  APAMLADVIKKCWIRDPQQRPTMSQVVQMMYEITGK
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Template Sequence  CPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE
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   647..650.........660.........670.........680..
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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