Return to main results Retrieve Phyre Job Id

Job DescriptionQ20933
Confidence100.00%DateFri May 3 21:32:28 BST 2013
Rank241Aligned Residues244
% Identity20%Templatec2ac5A_
PDB info PDB header:transferaseChain: A: PDB Molecule:map kinase-interacting serine/threonine kinase 2; PDBTitle: structure of human mnk2 kinase domain mutant d228g
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   113......120 .........130.........140.........150.........160.........170. ........180.........190
Predicted Secondary structure  .













.





Query SS confidence 







.


















































.


















Query Sequence  ADITMTKV. LGEGAFGEVKLGTLKMGSTTVDVAIKVAKLEKVTKEQIKEIITEARLMRGF. DHKNVVKCYGVAAIDEPLL
Query Conservation          .

 
 

 
             



                 
  

  
. 
 


             
Alig confidence 







.


















..















..











.


















Template Conservation    
 
    

 
 

 

 
       .. 



 
         ..    

 

  
  




             
Template Sequence  DVYQLQEDVLGEGAHARVQTCINLITSQ. . EYAVKIIEKQPGHIRS. . RVFREVEMLYQCQGHRNVLELIEFFEEEDRFY
Template Known Secondary structure  GS
S



SS
SSS

..

SS

..T


TTB


SS
Template Predicted Secondary structure 







..


..












Template SS confidence 















































































   81........90.........100........ .110.........120.... .....130.........140.........150......
 
   191........200.........210.........220.........230.........240.........250.........260.........270
Predicted Secondary structure 
















































Query SS confidence 















































































Query Sequence  VVMELVPGGALDKYLQKNSSVQWPEKLDIIAQVAAGLAYIHSKNIIHRDIAARNILYGKGVAKVSDFGLSRVGTEYQMDP
Query Conservation 

 
    
 
                     
   
  

     
 


  
        

 




          
Alig confidence 




























































....














Template Conservation   
 
                            
                     
      ....               
Template Sequence  LVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPN. . . . QVSPVKICDFGPCGS
Template Known Secondary structure 

TT
BS


TTT


S


GGG
TT....B





SS
Template Predicted Secondary structure 

































....














Template SS confidence 















































































   157..160.........170.........180.........190.........200.........210....... ..220.........230..
 
   271........280.........290.........300.........310....... ..320.........330..... ..
Predicted Secondary structure 
























...........







..

Query SS confidence 














































. . . . . . . . . . .

















. .

Query Sequence  SKRVPIRWLSPETIVSFLYTPQTDVFAFSILCWEVIENGAQPYPEML. . . . . . . . . . . VVQVHQKVGRDDYRMPIS. . QK
Query Conservation         
 


          






  
 

 
 
  
     ...........       
          ..  
Alig confidence 




































.








...........

















..

Template Conservation                         



 
  
 

  .
  

                      
              
Template Sequence  AEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLS. GYPPFVGRCGSDCGWACPACQNMLFESIQEGKYEFPDKDWAH
Template Known Secondary structure  GGG

SSSTTTT.SS
SS



SS





TT




TT
Template Predicted Secondary structure 













.

















Template SS confidence 















































































   254.....260.........270.........280.........290 .........300.........310.........320.........330..
 
   338.340.........350.........360.....
Predicted Secondary structure 








Query SS confidence 



























Query Sequence  APAMLADVIKKCWIRDPQQRPTMSQVVQ
Query Conservation      
  

  

  

  


   
  
Alig confidence 



























Template Conservation   
     

   
  

  



 


 
Template Sequence  ISCAAKDLISKLLVRDAKQRLSAAQVLQ
Template Known Secondary structure  S
S
S
TTTS

Template Predicted Secondary structure 









Template SS confidence 



























   337..340.........350.........360....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D