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Job DescriptionQ20933
Confidence100.00%DateFri May 3 21:32:28 BST 2013
Rank93Aligned Residues300
% Identity18%Templatec1kobB_
PDB info PDB header:kinaseChain: B: PDB Molecule:twitchin; PDBTitle: twitchin kinase fragment (aplysia), autoregulated protein2 kinase domain
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   113......120.........130.........140.........150.........160.........170.........180.........190..
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Query Sequence  ADITMTKVLGEGAFGEVKLGTLKMGSTTVDVAIKVAKLEKVTKEQIKEIITEARLMRGFDHKNVVKCYGVAAIDEPLLVV
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Template Sequence  DYYDILEELGSGAFGVVHRCVEKATGR. . VFVAKFINTP. . YPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLI
Template Known Secondary structure  GTTTTTT

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..STT

STTB


SS
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   51........60.........70....... ..80....... ..90.........100.........110.........120......
 
   193......200......... 210.........220.........230.........240........ .250.........260........
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Query Sequence  MELVPGGALDKYLQKNS. SVQWPEKLDIIAQVAAGLAYIHSKNIIHRDIAARNILYG. . . KGVAKVSDFGLSRVGTEYQM
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Template Sequence  LEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEI
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BTT
TT



TTT




GGGSSTT
S



TT


TTS
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   127..130.........140.........150.........160.........170.........180.........190.........200......
 
   269270.........280.........290.........300.........310.........320.........330...... ...340......
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Query Sequence  DPSKRVPIRWLSPETIVSFLYTPQTDVFAFSILCWEVIENGAQPYPEMLVVQVHQKVGRDDYRMPISQ. . KAPAMLADVI
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Template Sequence  VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLS. GLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFI
Template Known Secondary structure 
TTGGG

TT

B
.S

TT

SST




TTTTTTS
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   207..210.........220.........230.........240..... ....250.........260.........270.........280.....
 
   347..350.........360..... ....370.........380.........390.........400.........410.......
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Query Sequence  KKCWIRDPQQRPTMSQVVQ. . MMYEITGKKDKTSVNKSTGQLRAKMMSTGPMSDPMRDKTAKKTGRRNKKKPS
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Template Sequence  KNLLQKEPRKRLTVHDALEHPWLKGDHSNLTSRIPSSRYNKIRQKIKEKYADWPAPQPAIGRIANFSSLRKHR
Template Known Secondary structure  TTS
SSGGGS

TTSS

TT





GGGGTTTS


SSGGGGGGG

GGGTT
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   286...290.........300.........310.........320.........330.........340.........350........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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