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Job DescriptionQ20933
Confidence100.00%DateFri May 3 21:32:28 BST 2013
Rank91Aligned Residues246
% Identity24%Templatec2cgvA_
PDB info PDB header:transferaseChain: A: PDB Molecule:serine/threonine-protein kinase chk1; PDBTitle: identification of chemically diverse chk1 inhibitors by2 receptor-based virtual screening
Resolution2.6 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   113......120.........130.........140.........150.........160.........170.........180.........190..
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Query Sequence  ADITMTKVLGEGAFGEVKLGTLKMGSTTVDVAIKVAKLEKVTKEQIKEIITEARLMRGFDHKNVVKCYGVAAIDEPLLVV
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Template Sequence  EDWDLVQTLGEGAYGEVQLAVNRVTEE. . AVAVKIVDMKRCPE. . . . NIKKEICINKMLNHENVVKFYGHRREGNIQYLF
Template Known Secondary structure 
S



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STT
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   7..10.........20.........30... ......40....... ..50.........60.........70.........80
 
   193......200.........210.........220.........230.........240..... ....250.........260. .......
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Query Sequence  MELVPGGALDKYLQKNSSVQWPEKLDIIAQVAAGLAYIHSKNIIHRDIAARNI. LYGKGVAKVSDFGLSR. . . VGTEYQM
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Template Sequence  LEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL
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TTGGGGSBTTTB

TT
S

SGGG
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TT

TT

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   84.....90.........100.........110.........120.........130.........140.........150.........160...
 
   269270.........280........ .290.........300.........310....... ..320.........330.........340......
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Query Sequence  DPSKRVPIRWLSPETIVSFL. YTPQTDVFAFSILCWEVIENGAQPYPEML. VVQVHQKVGRDDYRMPISQKAPAMLADVI
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Template Sequence  LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA. GELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALL
Template Known Secondary structure  B
S

S
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TTSTTGGGT
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   164.....170.........180.........190.........200... ......210.........220.........230.........240..
 
   347..350.........360.....
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Query Sequence  KKCWIRDPQQRPTMSQVVQ
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Template Sequence  HKILVENPSARITIPDIKK
Template Known Secondary structure  S
SSTTTS

TT
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   243......250.........260.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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