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Job DescriptionQ20933
Confidence100.00%DateFri May 3 21:32:28 BST 2013
Rank134Aligned Residues253
% Identity20%Templatec3c0hB_
PDB info PDB header:transferaseChain: B: PDB Molecule:peripheral plasma membrane protein cask; PDBTitle: cask cam-kinase domain- amppnp complex, p1 form
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   109110.........120.........130.........140.........150...... ...160.........170.........180.....
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Query Sequence  ELNHADITMTKVLGEGAFGEVKLGTLKMGSTTVDVAIKVAKLEKVTKE. . . QIKEIITEARLMRGFDHKNVVKCYGVAAI
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Template Sequence  VLFEDVYELCEVIGKGPFSVVRRCINRETGQ. . QFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSS
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   6...10.........20.........30...... ...40.........50.........60.........70.........80...
 
   186...190.........200......... 210.........220.........230.........240........ .250.......
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Query Sequence  DEPLLVVMELVPGGALDKYLQKNS. . . . SVQWPEKLDIIAQVAAGLAYIHSKNIIHRDIAARNILYG. . . . KGVAKVSDF
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Template Sequence  DGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGF
Template Known Secondary structure  TT


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   84.....90.........100.........110.........120.........130.........140.........150.........160...
 
   258.260.. .......270.........280.........290.........300.........310.........320.........330.....
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Query Sequence  GLSRV. GTEYQMDPSKRVPIRWLSPETIVSFLYTPQTDVFAFSILCWEVIENGAQPYPEMLVVQVHQKVGRDDYRMPIS.
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Template Sequence  GVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLS. GCLPFYG. TKERLFEGIIKGKYKMNPRQ
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TTS
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   164.....170.........180.........190.........200.........210.... .....220. ........230.........240.
 
   336...340.........350.........360.....
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Query Sequence  . QKAPAMLADVIKKCWIRDPQQRPTMSQVVQ
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Template Sequence  WSHISESAKDLVRRMLMLDPAERITVYEALN
Template Known Secondary structure  TTS
T
SSTTTS

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   242.......250.........260.........270..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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