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Job DescriptionQ20933
Confidence100.00%DateFri May 3 21:32:28 BST 2013
Rank123Aligned Residues252
% Identity25%Templatec3ku2A_
PDB info PDB header:transferaseChain: A: PDB Molecule:calmodulin-domain protein kinase 1; PDBTitle: crystal structure of inactivated form of cdpk1 from toxoplasma gondii,2 tgme49.101440
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  LNHADITMTKVLGEGAFGEVKLGTLKMGSTTVDVAIKVAKLEKV. TKEQIKEIITEARLMRGFDHKNVVKCYGVAAIDEP
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Template Sequence  IFSDRYKGQRVLGKGSFGEVILCKDKITGQ. . ECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGY
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Query Sequence  LLVVMELVPGGALDKYLQKNSSVQWPEKLDIIAQVAAGLAYIHSKNIIHRDIAARNILYG. . . . KGVAKVSDFGLSRVGT
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Template Sequence  FYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE
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   124.....130.........140.........150.........160.........170.........180.........190.........200...
 
   265....270.........280.........290.........300.........310.........320.........330.. .......340..
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Query Sequence  EYQMDPSKRVPIRWLSPETIVSFLYTPQTDVFAFSILCWEVIENGAQPYPEMLVVQVHQKVGRDDYRM. . PISQKAPAML
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Template Sequence  ASKKMKDKIGTAYYIAPEVLH. GTYDEKCDVWSTGVILYILLS. GCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESA
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   204.....210.........220.... .....230.........240..... ....250.........260.........270.........280.
 
   343......350.........360.....
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Query Sequence  ADVIKKCWIRDPQQRPTMSQVVQ
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Template Sequence  KDLIRKMLTYVPSMRISARDALD
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   282.......290.........300....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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