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Job DescriptionQ20933
Confidence100.00%DateFri May 3 21:32:28 BST 2013
Rank18Aligned Residues248
% Identity23%Templatec1koaA_
PDB info PDB header:kinaseChain: A: PDB Molecule:twitchin; PDBTitle: twitchin kinase fragment (c.elegans), autoregulated protein2 kinase and immunoglobulin domains
Resolution3.30 Å
Model Dimensions (Å)X: Y: Z:

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   113......120.........130.........140.........150.........160.........170.........180.........190..
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Query Sequence  ADITMTKVLGEGAFGEVKLGTLKMGSTTVDVAIKVAKLEKVTKEQIKEIITEARLMRGFDHKNVVKCYGVAAIDEPLLVV
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Template Sequence  DHYDIHEELGTGAFGVVHRVTERATGN. . NFAAKFVMTP. . HESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMI
Template Known Secondary structure  GTTTTTTT..


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   5940.........5950.........5960...... ...5970...... ...5980.........5990.........6000.........6010.....
 
   193......200. ........210.........220.........230.........240......... 250.........260........
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Query Sequence  MELVPGGAL. DKYLQKNSSVQWPEKLDIIAQVAAGLAYIHSKNIIHRDIAARNILYGK. . . GVAKVSDFGLSRVGTEYQM
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Template Sequence  YEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS
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   6016...6020.........6030.........6040.........6050.........6060.........6070.........6080.........6090.....
 
   269270.........280.........290.........300.........310.........320.........330..... ....340......
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Query Sequence  DPSKRVPIRWLSPETIVSFLYTPQTDVFAFSILCWEVIENGAQPYPEMLVVQVHQKVGRDDYRMPIS. . QKAPAMLADVI
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Template Sequence  VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLS. GLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFI
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   6096...6100.........6110.........6120.........6130.... .....6140.........6150.........6160.........6170....
 
   347..350.........360.....
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Query Sequence  KKCWIRDPQQRPTMSQVVQ
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Template Sequence  RKLLLADPNTRMTIHQALE
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SSGGGS

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   6175....6180.........6190...
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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