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Job DescriptionQ20933
Confidence100.00%DateFri May 3 21:32:28 BST 2013
Rank284Aligned Residues242
% Identity22%Templatec1jnkA_
PDB info PDB header:transferaseChain: A: PDB Molecule:c-jun n-terminal kinase; PDBTitle: the c-jun n-terminal kinase (jnk3s) complexed with mgamp-pnp
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   113......120.........130.........140.........150.........160.........170.........180......
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Query Sequence  ADITMTKVLGEGAFGEVKLGTLKMGSTTVDVAIKVAKLEKVTKEQIKEIITEARLMRGFDHKNVVKCYGVAAID. . . . . .
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Template Sequence  KRYQNLKPIGSGAQGIVCAAYDAVLDR. . NVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEF
Template Known Secondary structure  TT
SSTTTT..SGGGS


TTB


S

STTT
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   62.......70.........80........ .90.........100.........110.........120.........130.........
 
   187..190.........200.........210.........220.........230.........240..... ....250.........260.....
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Query Sequence  EPLLVVMELVPGGALDKYLQKNSSVQWPEKLDIIAQVAAGLAYIHSKNIIHRDIAARNI. LYGKGVAKVSDFGLSRVGTE
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Template Sequence  QDVYLVMELMDANLCQVI. . . QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLASFMMT
Template Known Secondary structure 


S...TS


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   140.........150....... ..160.........170.........180.........190.........200.........210......
 
   266...270.........280.........290.........300.........310.........320.........330....
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Query Sequence  YQMDPSKRVPIRWLSPETIVSFLYTPQTDVFAFSILCWEVIENGAQPYPEMLVVQVHQKVGRDDYRMPI. . . . . . . . . . .
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Template Sequence  PYV. . . . . VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVR. HKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR
Template Known Secondary structure  SS
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TT

TT



TT.SS
SS

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   222.. .....230.........240.........250........ .260.........270.........280.........290.....
 
   335....340.........350.........360.....
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . SQKAPAMLADVIKKCWIRDPQQRPTMSQVVQ
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Template Sequence  NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ
Template Known Secondary structure  TS






S
TTSS

SSS
S
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S
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   296...300.........310.........320.........330.........340.........350.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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