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Job DescriptionQ20933
Confidence100.00%DateFri May 3 21:32:28 BST 2013
Rank65Aligned Residues241
% Identity24%Templatec3hztA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calcium-dependent protein kinase 3; PDBTitle: crystal structure of toxoplasma gondii cdpk3, tgme49_105860
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   113......120.........130.........140.........150... ......160.........170.........180.........190.
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Query Sequence  ADITMTKVLGEGAFGEVKLGTLKMGSTTVDVAIKVAKLEKV. TKEQIKEIITEARLMRGFDHKNVVKCYGVAAIDEPLLV
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Template Sequence  DRYQRVKKLGSGAYGEVLLCKDKLTGA. . ERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYL
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   74.....80.........90.........100 .........110.........120.........130.........140.........150.
 
   192.......200.........210.........220.........230.........240....... ..250.........260.......
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Query Sequence  VMELVPGGALDKYLQKNSSVQWPEKLDIIAQVAAGLAYIHSKNIIHRDIAARNILY. . . . GKGVAKVSDFGLSRVGTEYQ
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Template Sequence  VMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHF. . . .
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   152.......160.........170.........180.........190.........200.........210.........220.......
 
   268.270.........280.........290.........300.........310.........320.........330...... ...340.....
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Query Sequence  MDPSKRVPIRWLSPETIVSFLYTPQTDVFAFSILCWEVIENGAQPYPEMLVVQVHQKVGRDDYRMPISQ. . KAPAMLADV
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Template Sequence  . . . . . EVGTAYYIAPEVLRKKYDEKCDVWSCGVILYILLC. GYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQL
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   228.230.........240.........250.........260.. .......270.........280.........290.........300.
 
   346...350.........360.....
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Query Sequence  IKKCWIRDPQQRPTMSQVVQ
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Template Sequence  VKLMLTYEPSKRISAEEALN
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   310.........320.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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