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Job DescriptionQ20933
Confidence99.62%DateFri May 3 21:32:28 BST 2013
Rank379Aligned Residues92
% Identity23%Templatec2c9wA_
PDB info PDB header:transcription regulationChain: A: PDB Molecule:suppressor of cytokine signaling 2; PDBTitle: crystal structure of socs-2 in complex with elongin-b and2 elongin-c at 1.9a resolution
Resolution1.9 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.... .....30.........40.........50.........60......... 70..
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Query Sequence  EINEQPFFHGLLPREEVKLLLQK. . NGDYLMRTSEPQGQARHLIISVMQNETSQEVAHYVIRTSDGAYSI. . . . . . . TDK
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Template Sequence  ELGQTGWYWGSMTVNEAKEKLKEAPEGTFLIRDSSHSDY. . LLTISVKTSAG. . . PTNLRIEYQDGKFRLDSIICVKSKL
Template Known Secondary structure  TS
B
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STT
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TTTTTGGG
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   42.......50.........60.........70.........80 .........90. ........100.........110......
 
   73......80.........90........
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Query Sequence  IKFGTLTELVNHHKQAKISEEVASSV
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Template Sequence  KQFDSVVHLIDYYVQMCKHLYLTKPL
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BS
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   117..120.........130.........140..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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