Return to main results Retrieve Phyre Job Id

Job DescriptionQ20933
Confidence100.00%DateFri May 3 21:32:28 BST 2013
Rank51Aligned Residues251
% Identity22%Templatec2bdwB_
PDB info PDB header:transferaseChain: B: PDB Molecule:hypothetical protein k11e8.1d; PDBTitle: crystal structure of the auto-inhibited kinase domain of2 calcium/calmodulin activated kinase ii
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   112.......120.........130.........140.........150.........160.........170.........180.........190.
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Query Sequence  HADITMTKVLGEGAFGEVKLGTLKMGSTTVDVAIKVAKLEKVTKEQIKEIITEARLMRGFDHKNVVKCYGVAAIDEPLLV
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Template Sequence  SDNYDVKEELGKGAFSVVRRCVHKTTGL. . EFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL
Template Known Secondary structure  TTTTTTTT

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SS




TTB


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   10.........20.........30....... ..40.........50.........60.........70.........80.......
 
   192.......200.........210.........220.........230.........240........ .250.........260.......
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Query Sequence  VMELVPGGALDKYLQKNSSVQWPEKLDIIAQVAAGLAYIHSKNIIHRDIAARNILYG. . . . KGVAKVSDFGLSRVGTEYQ
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Template Sequence  VFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE
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S
BTT
S


TT
B



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TT
B

TT

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   88.90.........100.........110.........120.........130.........140.........150.........160.......
 
   268.270.........280.........290.........300.........310.........320.........330..... ....340.....
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Query Sequence  MDPSKRVPIRWLSPETIVSFLYTPQTDVFAFSILCWEVIENGAQPYPEMLVVQVHQKVGRDDYRMPIS. . QKAPAMLADV
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Template Sequence  AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLV. GYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSL
Template Known Secondary structure  B


S
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GGG

T

B
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TTGGGGS
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   169170.........180.........190.........200........ .210.........220.........230.........240.......
 
   346...350.........360.....
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Query Sequence  IKKCWIRDPQQRPTMSQVVQ
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Template Sequence  IDSMLTVNPKKRITADQALK
Template Known Secondary structure  S
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TT
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   248.250.........260.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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