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Job DescriptionQ20933
Confidence100.00%DateFri May 3 21:32:28 BST 2013
Rank239Aligned Residues208
% Identity27%Templatec2hakH_
PDB info PDB header:signaling protein,transferaseChain: H: PDB Molecule:serine/threonine-protein kinase mark1; PDBTitle: catalytic and ubiqutin-associated domains of mark1/par-1
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   113......120.........130.........140.........150.........160.........170.........180.........190..
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Query Sequence  ADITMTKVLGEGAFGEVKLGTLKMGSTTVDVAIKVAKLEKVTKEQIKEIITEARLMRGFDHKNVVKCYGVAAIDEPLLVV
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Template Sequence  GNYRLQKTIGKGNFAKVKLARHVLTGR. . EVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLV
Template Known Secondary structure  TT
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   51........60.........70....... ..80.........90.........100.........110.........120........
 
   193......200.........210.........220.........230.........240......... 250.........260.........270.
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Query Sequence  MELVPGGALDKYLQKNSSVQWPEKLDIIAQVAAGLAYIHSKNIIHRDIAARNILYGK. GVAKVSDFGLSRVGTEYQMDPS
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Template Sequence  MEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFT. . . . . . .
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TT
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   129130.........140.........150.........160.........170.........180.........190.........200.
 
   272.......280.........290.........300.........310.........320.........330.........340.........350.
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Query Sequence  KRVPIRWLSPETIVSFLYTPQTDVFAFSILCWEVIENGAQPYPEMLVVQVHQKVGRDDYRMPISQKAPAMLADVIKKCWI
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Template Sequence  . . . . . . . . . . . . . . . . . VGPEVDVWSLGVILYTLVS. GSLPF. . . . . . . . . . . . . . . . . . DRIPFYMSTDCENLLKKLLV
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   202.......210.........220 ..... ....230.........240.....
 
   352.......360.....
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Query Sequence  RDPQQRPTMSQVVQ
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Template Sequence  LNPIKRGSLEQIMK
Template Known Secondary structure  SSGGGS

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   287..290.........300
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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