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Job DescriptionQ20933
Confidence100.00%DateFri May 3 21:32:28 BST 2013
Rank243Aligned Residues256
% Identity22%Templatec1vzoA_
PDB info PDB header:transferaseChain: A: PDB Molecule:ribosomal protein s6 kinase alpha 5; PDBTitle: the structure of the n-terminal kinase domain of msk12 reveals a novel autoinhibitory conformation for a dual3 kinase protein
Resolution1.8 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   109110.........120.........130...... ...140.........150. ........160........ .170.........180....
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Query Sequence  ELNHADITMTKVLGEGAFGEVKLGTLKM. GSTTVDVAIKVAKLE. . KVTKEQIKEIITEARLM. RGFDHKNVVKCYGVAA
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Template Sequence  KVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQ
Template Known Secondary structure 


GGGTTT
SSTTTT
SSSGGG


T
TTB

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   43......50.........60.........70.........80.........90.........100.........110.........120..
 
   185....190.........200.........210.........220.........230.........240..... ....250.........260...
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Query Sequence  IDEPLLVVMELVPGGALDKYLQKNSSVQWPEKLDIIAQVAAGLAYIHSKNIIHRDIAARNI. LYGKGVAKVSDFGLSRVG
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Template Sequence  TETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEF
Template Known Secondary structure  TT



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BS


TT






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   123......130.........140.........150.........160.........170.........180.........190.........200..
 
   264. ....270.........280.........290.........300.........310.........320........ .330.........340
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Query Sequence  TE. YQMDPSKRVPIRWLSPETIVSFLYTPQTDVFAFSILCWEVIENGAQPYPEMLVVQVHQKVGRD. . DYRMPISQKAPA
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Template Sequence  VADETERAYDFCGTIEYMAPDIVRGGDDKAVDWWSLGVLMYELLT. GASPFTVDGEKNSQAEISRRILKSEPPYPQEMSA
Template Known Secondary structure 
GGGGGGG
GGGS

TT

TT


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TTS
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   203......210.........220.........230.........240....... ..250.........260.........270.........280.
 
   341........350........ .360.....
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Query Sequence  MLADVIKKCWIRDPQQRP. . . . . TMSQVVQ
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Template Sequence  LAKDLIQRLLMKDPKKRLGCGPRDADEIKE
Template Known Secondary structure  T
SSGGGSTTSSTTTT
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   285....290.........300.........310....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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