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Job DescriptionQ20933
Confidence100.00%DateFri May 3 21:32:28 BST 2013
Rank163Aligned Residues242
% Identity18%Templatec2j2iB_
PDB info PDB header:transferaseChain: B: PDB Molecule:proto-oncogene serine/threonine-protein kinase pim-1; PDBTitle: crystal structure of the humab pim1 in complex with2 ly333531
Resolution1.9 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   113......120.........130.........140.........150..... ....160.........170.. .......180......
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Query Sequence  ADITMTKVLGEGAFGEVKLGTLKMGSTTVDVAIKVAKLEKVTK. . . . EQIKEIITEARLMRGFD. . HKNVVKCYGVAAID
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Template Sequence  SQYQVGPLLGSGGFGSVYSGIRVSDNL. . PVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP
Template Known Secondary structure  TTTTTT..GGG



TT


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SB


S
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   36...40.........50.........60.. .......70.........80.........90.........100.........110...
 
   187..190........ .200.........210.........220.........230.........240......... 250.........260...
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Query Sequence  EPLLVVMELVPG. GALDKYLQKNSSVQWPEKLDIIAQVAAGLAYIHSKNIIHRDIAARNILYGK. . GVAKVSDFGLSRVG
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Template Sequence  DSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL
Template Known Secondary structure  S

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SGGGTTTT


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   114.....120.........130.........140.........150.........160.........170.........180.........190...
 
   264.....270.........280.........290.........300.........310.........320.........330.........340...
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Query Sequence  TEYQMDPSKRVPIRWLSPETIVSFLYTPQTDVFAFSILCWEVIENGAQPYPEMLVVQVHQKVGRDDYRMPISQKAPAMLA
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Template Sequence  KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVC. GDIPFEHD. . . . . . EEIIGGQV. . FFRQRVSSECQ
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   194.....200.........210.........220.........230....... ..240..... ....250... ......260....
 
   344.....350.........360.....
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Query Sequence  DVIKKCWIRDPQQRPTMSQVVQ
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Template Sequence  HLIRWCLALRPSDRPTFEEIQN
Template Known Secondary structure  T
SSGGGS

T
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   265....270.........280......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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