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Job DescriptionQ20933
Confidence97.54%DateFri May 3 21:32:28 BST 2013
Rank426Aligned Residues154
% Identity23%Templatec3lzhA_
PDB info PDB header:transferaseChain: A: PDB Molecule:aph(2")-id/aph(2")-iva; PDBTitle: crystal structure of aminoglycoside phosphotransferase aph(2")-2 id/aph(2")-iva
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   119120.........130.........140.........150.........160.........170..... ....180......... 190..
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Query Sequence  KVLGEGAFGEVKLGTLKMGSTTVDVAIKVAKLEKVTKEQIKEIITEARLMRGFDHKN. . . VVKCYGVAAIDEPL. . . LVV
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Template Sequence  EISGEGNDCIAYEI. . . . . . . NGNFIFKFPKH. . . . SRASINLLNEVTVLKTIHNELSLPIPEVVFTGXPSEXCQXSFAG
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SS.......TTTSS....TT
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   26...30......... 40.........50 .........60.........70.........80.........90....
 
   193......200.........210.........220.........230...
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Query Sequence  MELVPGGALDKYLQKNSSVQWPEKLDIIAQVAAGLAYIHSK. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  FTKIKGVPLTPLLLK. . NLPKQSQDQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGHQXKK
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   95....100......... 110.........120.........130.........140.........150.........160.........170..
 
   234.....240.........250... ......260.........270.........280.....
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Query Sequence  . . . . . . . . . . . . . . . . . . . NIIHRDIAARNILYGKGVAK. . . VSDFGLSRVGTEYQMDPSKRVPIRWLSPETIV
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Template Sequence  VDDFYRDILDNEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLXEDDEEYGXEFVS
Template Known Secondary structure  T
GGGT




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SGGGTTTT


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   173......180.........190.........200.........210.........220.........230.........240......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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