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Job DescriptionQ20933
Confidence100.00%DateFri May 3 21:32:28 BST 2013
Rank164Aligned Residues243
% Identity21%Templatec3dbqA_
PDB info PDB header:transferaseChain: A: PDB Molecule:dual specificity protein kinase ttk; PDBTitle: crystal structure of ttk kinase domain
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   109110.........120.........130.........140.........150.........160.........170.. .......180......
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Query Sequence  ELNHADITMTKVLGEGAFGEVKLGTLKMGSTTVDVAIKVAKLEKVTKEQIKEIITEARLMRGFD. . HKNVVKCYGVAAID
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Template Sequence  SVKGRIYSILKQIGSGGSSKVFQVLNEKKQ. . . IYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITD
Template Known Secondary structure  SSS
S

SS
TTS
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TT

TTT
TTB


S
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   519520.........530.........540........ .550.........560.........570.........580.........590.....
 
   187..190.........200.........210.........220.........230.........240.........250.........260......
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Query Sequence  EPLLVVMELVPGGALDKYLQKNSSVQWPEKLDIIAQVAAGLAYIHSKNIIHRDIAARNILYGKGVAKVSDFGLSRVGTEY
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Template Sequence  QYIYMVMECGNI. DLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIA. . . . . .
Template Known Secondary structure  S


S.S



TT






GGGTT


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   596...600....... ..610.........620.........630.........640.........650.........660........
 
   267..270.........280.........290.........300.........310...... ...320.........330.........340.....
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Query Sequence  QMDPSKRVPIRWLSPETIVSFLYTPQTDVFAFSILCWEVIENGAQPYPEM. LVVQVHQKVGRDDYRMPISQKAPAMLADV
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Template Sequence  . . . NQMVGTVNYMPPEAIKDMSISPKSDVWSLGCILYYMTY. GKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDV
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SS





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   669670.........680.........690.........700...... ...710.........720.........730.........740....
 
   346...350.........360.....
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Query Sequence  IKKCWIRDPQQRPTMSQVVQ
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Template Sequence  LKCCLKRDPKQRISIPELLA
Template Known Secondary structure  T
SSTTTS

T
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   768.770.........780.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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