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Job DescriptionQ20933
Confidence100.00%DateFri May 3 21:32:28 BST 2013
Rank296Aligned Residues239
% Identity19%Templatec3oz6A_
PDB info PDB header:transferaseChain: A: PDB Molecule:mitogen-activated protein kinase 1, serine/threonine PDBTitle: crystal structure of mapk from cryptosporidium parvum, cgd2_1960
Resolution2.37 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   113......120.........130.........140.........150.........160.........170.. .......180....... ..
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Query Sequence  ADITMTKVLGEGAFGEVKLGTLKMGSTTVDVAIKVAKLEKVTKEQIKEIITEARLMRGFD. HKNVVKCYGVAAIDE. . PL
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Template Sequence  RKYELVKKI. . . . . . . VWKSIDRRTGE. . VVAVKKIFDQ. . NSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV
Template Known Secondary structure  TT

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   910....... ..20........ .30........ .40.........50.........60.........70.......
 
   190.........200.........210.........220.........230.........240..... ....250.........260........
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Query Sequence  LVVMELVPGGALDKYLQKNSSVQWPEKLDIIAQVAAGLAYIHSKNIIHRDIAARNI. LYGKGVAKVSDFGLSRVGTEYQM
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Template Sequence  YLVFDYMETDLHAVIRAN. . ILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRR
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   87..90.........100.... .....110.........120.........130.........140.........150.........160....
 
   269270.... .....280.........290.........300.........310.........320.........330...
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Query Sequence  DPSKRV. . . . . . . . PIRWLSPETIVSFLYTPQTDVFAFSILCWEVIENGAQPYPEMLVVQVHQKVGRDDYRMP. . . . . . .
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Template Sequence  VTNNIPLSINYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILC. GKPIFPGSSTMNQLERIIGVIDFPSNEDVESI
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   165....170.........180.........190.........200.........210. ........220.........230.........240...
 
   334.....340.........350.........360.....
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ISQKAPAMLADVIKKCWIRDPQQRPTMSQVVQ
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Template Sequence  QSPFAKTMIESLKEKVEKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISANDALK
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TT





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   259260.........270.........280.........290.........300.........310.........320...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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