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Job DescriptionQ20933
Confidence100.00%DateFri May 3 21:32:28 BST 2013
Rank240Aligned Residues241
% Identity22%Templatec3txoA_
PDB info PDB header:transferase/transferase inhibitorChain: A: PDB Molecule:protein kinase c eta type; PDBTitle: pkc eta kinase in complex with a naphthyridine
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   113......120.........130.........140.........150... ......160.........170. ........180.........190
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Query Sequence  ADITMTKVLGEGAFGEVKLGTLKMGSTTVDVAIKVAKLEKV. TKEQIKEIITEARLMRGF. DHKNVVKCYGVAAIDEPLL
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Template Sequence  DNFEFIRVLGKGSFGKVMLARVKETGD. . LYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLF
Template Known Secondary structure 

TTTTT

..TTTTT
TTB


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   353......360.........370......... 380.........390.........400.........410.........420.........430
 
   191........200.........210.........220.........230.........240.........250.........260.........270
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Query Sequence  VVMELVPGGALDKYLQKNSSVQWPEKLDIIAQVAAGLAYIHSKNIIHRDIAARNILYGKGVAKVSDFGLSRVGTEYQMDP
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Template Sequence  FVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKE. . . . . . .
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S
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   431........440.........450.........460.........470.........480.........490.........500...
 
   271........280.........290.........300.........310.........320.........330.........340.........350
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Query Sequence  SKRVPIRWLSPETIVSFLYTPQTDVFAFSILCWEVIENGAQPYPEMLVVQVHQKVGRDDYRMPISQKAPAMLADVIKKCW
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Template Sequence  GICGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLC. GHAPFEAENEDDLFEAILNDEV. . VYPTWLHEDATGILKSFM
Template Known Secondary structure  S



GGG


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   504.....510.........520.........530.........540 .........550.........560.. .......570.........580
 
   351........ 360.....
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Query Sequence  IRDPQQRPT. . . . . . MSQVVQ
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Template Sequence  TKNPTMRLGSLTQGGEHAILR
Template Known Secondary structure 
SSGGGSTTSGGGT
TT
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   590.........600.........610
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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