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Job DescriptionQ20933
Confidence100.00%DateFri May 3 21:32:28 BST 2013
Rank120Aligned Residues250
% Identity23%Templatec2vrxB_
PDB info PDB header:cell cycle/transferaseChain: B: PDB Molecule:serine/threonine-protein kinase 12-a; PDBTitle: structure of aurora b kinase in complex with zm447439
Resolution1.86 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  ELNHADITMTK. VLGEGAFGEVKLGTLKMGSTTVDVAIKVAKLEK. VTKEQIKEIITEARLMRGFDHKNVVKCYGVAAID
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Template Sequence  EMPKRKFTIDDFDIGRPLGGNVYLAREKQNKF. . IMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDR
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GGG


TTTT..TTTS
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   82.......90.........100.........110... ......120.........130.........140.........150.........
 
   187..190.........200.........210.........220.........230.........240..... ....250.........260.....
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Query Sequence  EPLLVVMELVPGGALDKYLQKNSSVQWPEKLDIIAQVAAGLAYIHSKNIIHRDIAARNI. LYGKGVAKVSDFGLSRVGTE
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Template Sequence  KRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS
Template Known Secondary structure  S


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   164.....170.........180.........190.........200.........210.........220.........230.........240...
 
   266...270.........280.........290.........300.........310.........320.........330.........340.....
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Query Sequence  YQMDPSKRVPIRWLSPETIVSFLYTPQTDVFAFSILCWEVIENGAQPYPEMLVVQVHQKVGRDDYRMPISQKAPAMLADV
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Template Sequence  LR. . RRMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLV. GMPPFDSPSHTETHRRIVNV. . DLKFPPFLSDGSKDL
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   244. ....250.........260.........270.........280... ......290.........300... ......310........
 
   346...350.........360.....
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Query Sequence  IKKCWIRDPQQRPTMSQVVQ
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Template Sequence  ISKLLRYHPPQRLPLKGVME
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   320.........330.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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