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Job DescriptionQ20933
Confidence100.00%DateFri May 3 21:32:28 BST 2013
Rank114Aligned Residues280
% Identity20%Templatec2wtkB_
PDB info PDB header:transferase/metal-binding proteinChain: B: PDB Molecule:ste20-related kinase adapter protein alpha; PDBTitle: structure of the heterotrimeric lkb1-stradalpha-mo25alpha2 complex
Resolution2.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   111........120.... .....130.........140.........150.........160.........170.........180........
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Query Sequence  NHADITMTKVLGEG. . AFGEVKLGTLKMGSTTVDVAIKVAKLEKVTKEQIKEIITEARLMRGFDHKNVVKCYGVAAIDEP
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Template Sequence  EGGCYELLTVIGKGFEDLMTVNLARYKPTGE. . YVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNE
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GGGTTTTTTT

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   65....70.........80.........90..... ....100.........110.........120.........130.........140..
 
   189190.........200.........210 .........220.........230.........240..... ....250.........260
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Query Sequence  LLVVMELVPGGALDKYLQKNSS. . VQWPEKLDIIAQVAAGLAYIHSKNIIHRDIAARNI. LYGKGVAKVSDFGLS. . . . .
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Template Sequence  LWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMIS
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TTT
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SGGG
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   143......150.........160.........170.........180.........190.........200.........210.........220..
 
   261........270.........280....... ..290.........300.........310.........320.........330.....
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Query Sequence  . . . RVGTEYQMDPSKRVPIRWLSPETIVSF. . LYTPQTDVFAFSILCWEVIENGAQPYPEMLVVQVHQKVGRDDYRMPIS
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Template Sequence  HGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELAN. GHVPFDMPATQMLLEKL. . . . . . . . VP
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   223......230.........240.........250.........260.........270.... .....280.........290. ..
 
   336...340.........350.........360..... ....370.........380.........390.........400.
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Query Sequence  QKAPAMLADVIKKCWIRDPQQRPTMSQVVQ. . MMYEITGKKDKTSVNKSTGQLRAKMMSTGPMSDPMR
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Template Sequence  CLFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIKRRASEALPELLRPVTPITNFEGSQSQDHSG
Template Known Secondary structure 



T
SSGGGS

T
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SSGGGGSTT
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   298.300.........310.........320.........330.........340.........350.........360.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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