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Job DescriptionQ20933
Confidence100.00%DateFri May 3 21:32:28 BST 2013
Rank50Aligned Residues241
% Identity26%Templatec3lijA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calcium/calmodulin dependent protein kinase with PDBTitle: crystal structure of full length cpcdpk3 (cgd5_820) in2 complex with ca2+ and amppnp
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   113......120.........130.........140.........150.........160.........170.........180.........190..
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Query Sequence  ADITMTKVLGEGAFGEVKLGTLKMGSTTVDVAIKVAKLEKVTKEQIKEIITEARLMRGFDHKNVVKCYGVAAIDEPLLVV
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Template Sequence  EMYQRVKKLGSGE. . . VLLCRDKVTHV. . ERAIKIIRKSSN. . . . . SKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLV
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TT.....TT


TTB


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   60.........70.. .......80... ......90..... ....100.........110.........120.........
 
   193......200.........210.........220.........230.........240....... ..250.........260........
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Query Sequence  MELVPGGALDKYLQKNSSVQWPEKLDIIAQVAAGLAYIHSKNIIHRDIAARNILY. . . . GKGVAKVSDFGLSRVGTEYQM
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Template Sequence  MECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKK
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S
BSS

TT
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TT

BTTB
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   138.140.........150.........160.........170.........180.........190.........200.........210.......
 
   269270.........280.........290.........300.........310.........320.........330...... ...340......
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Query Sequence  DPSKRVPIRWLSPETIVSFLYTPQTDVFAFSILCWEVIENGAQPYPEMLVVQVHQKVGRDDYRMPISQ. . KAPAMLADVI
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Template Sequence  MKERLGTAYYIAPEVLR. KKYDEKCDVWSIGVILFILLA. GYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLI
Template Known Secondary structure  B



S
TTT

T.T
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SGGGTTS
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   218.220.........230.... .....240.........250..... ....260.........270.........280.........290.....
 
   347..350.........360.....
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Query Sequence  KKCWIRDPQQRPTMSQVVQ
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Template Sequence  KQMLQFDSQRRISAQQALE
Template Known Secondary structure  T
SSTTTS

T
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   296...300.........310....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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