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Job DescriptionQ20933
Confidence100.00%DateFri May 3 21:32:28 BST 2013
Rank272Aligned Residues240
% Identity25%Templatec4aaaA_
PDB info PDB header:transferaseChain: A: PDB Molecule:cyclin-dependent kinase-like 2; PDBTitle: crystal structure of the human cdkl2 kinase domain
Resolution1.53 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   113......120.........130.........140.........150.........160.........170.........180.........190..
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Query Sequence  ADITMTKVLGEGAFGEVKLGTLKMGSTTVDVAIKVAKLEKVTKEQIKEIITEARLMRGFDHKNVVKCYGVAAIDEPLLVV
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Template Sequence  EKYENLGLVGEGSYGMVMKCRNKDTGR. . IVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLV
Template Known Secondary structure  GGGGGGTTSSTTT

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   2.......10.........20........ .30.........40.........50.........60.........70.........
 
   193......200.........210.........220.........230.........240.........250.........260.........270..
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Query Sequence  MELVPGGALDKYLQKNSSVQWPEKLDIIAQVAAGLAYIHSKNIIHRDIAARNILYGKGVAKVSDFGLSRVGTEYQMDPSK
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Template Sequence  FEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENI. . . . . . . . . . LVSQSGVVKLCDFGFAE
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SSTT


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   80.........90.........100.........110.........120.........130.. .......140.........
 
   273......280...... ...290.........300.........310.........320.......
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Query Sequence  RVPIRWLSPETIVS. FLYTPQTDVFAFSILCWEVIENGAQPYPEMLVVQVHQKVGR. . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  VATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFM. GEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRL
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   162.......170.........180.........190....... ..200.........210.........220.........230.........240
 
   328.330.........340.........350.........360.....
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Query Sequence  . . . . . DDYRMPISQKAPAMLADVIKKCWIRDPQQRPTMSQVVQ
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Template Sequence  PEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH
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SSGGGS

GGGGGG
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   241........250.........260.........270.........280...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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