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Job DescriptionQ20933
Confidence99.62%DateFri May 3 21:32:28 BST 2013
Rank380Aligned Residues81
% Identity21%Templatec2vifA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:suppressor of cytokine signalling 6; PDBTitle: crystal structure of socs6 sh2 domain in complex with a c-kit2 phosphopeptide
Resolution1.45 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.... .....30.........40.........50.........60.........70.... ..
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Query Sequence  EINEQPFFHGLLPREEVKLLLQK. . NGDYLMRTSEPQGQARHLIISVMQNETSQEVAHYVIRTSDGAYSITDKIK. . . FG
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Template Sequence  KLAKQGWYWGPITRWEAEGKLANVPDGSFLVRDSSDDRYLLSLSFR. . . . . SHGKTLHTRIEHSNGRFSFYEQPDVEGHT
Template Known Secondary structure  T
B

S

TTTS
TT

SSTT
S.....TTTTTT

S


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   378.380.........390.........400.........410.........420... ......430.........440.........450..
 
   77..80.......
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Query Sequence  TLTELVNHHKQ
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Template Sequence  SIVDLIEHSIG
Template Known Secondary structure  S
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   453......460...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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