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Job DescriptionQ20933
Confidence100.00%DateFri May 3 21:32:28 BST 2013
Rank142Aligned Residues257
% Identity19%Templatec3sv0A_
PDB info PDB header:transferaseChain: A: PDB Molecule:casein kinase i-like; PDBTitle: crystal structure of casein kinase-1 like protein in plant
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   112.......120.........130.........140.........150.........160.........170... ......180.........190
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Query Sequence  HADITMTKVLGEGAFGEVKLGTLKMGSTTVDVAIKVAKLEKVTKEQIKEIITEARLMRGFDH. KNVVKCYGVAAIDEPLL
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Template Sequence  GNKFRLGRKIGSGSFGEIYLGTNIQTNE. . EVAIKLENVKTKH. . . . PQLLYESKIYRILQGGTGIPNVRWFGVEGDYNV
Template Known Secondary structure  TTT





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   6...10.........20.........30... ......40...... ...50.........60.........70.........
 
   191........200.........210.........220.........230.........240....... ..250.........260......
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Query Sequence  VVMELVPGGALDKYLQKNSSVQWPEKLDIIAQVAAGLAYIHSKNIIHRDIAARNILY. . . . GKGVAKVSDFGLSRVGTEY
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Template Sequence  LVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDT
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BTTT


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GGG

GGGTT



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   80.........90.........100.........110.........120.........130.........140.........150.........
 
   267..270... ......280.........290.........300.........310..... ....320.........330.....
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Query Sequence  QMDPSKR. . . . . . . . VPIRWLSPETIVSFLYTPQTDVFAFSILCWEVIENGAQPYPE. . . MLVVQVHQKVGRDDYRMPIS
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Template Sequence  STHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLR. GSLPWQGLKAGTKKQKYEKISEKKVATSIE
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   160.........170.........180.........190.........200........ .210.........220.........230........
 
   336 ...340.........350.........360.........370.....
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Query Sequence  Q. . . KAPAMLADVIKKCWIRDPQQRPTMSQVVQMMYEITGKKD
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Template Sequence  ALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIREG
Template Known Secondary structure  TTS
T

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   239240.........250.........260.........270.........280.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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