Return to main results Retrieve Phyre Job Id

Job DescriptionQ20933
Confidence100.00%DateFri May 3 21:32:28 BST 2013
Rank25Aligned Residues251
% Identity22%Templatec3c4wB_
PDB info PDB header:transferaseChain: B: PDB Molecule:rhodopsin kinase; PDBTitle: crystal structure of g protein coupled receptor kinase 1 bound to atp2 and magnesium chloride at 2.7a
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   110.........120.........130.........140.........150....... ..160.........170.........180........
Predicted Secondary structure 













.






Query SS confidence 















































.






























Query Sequence  LNHADITMTKVLGEGAFGEVKLGTLKMGSTTVDVAIKVAKLEKVTKEQ. IKEIITEARLMRGFDHKNVVKCYGVAAIDEP
Query Conservation             

 
 

 
             



           .      
  

  
 
 


           
Alig confidence 





























..















.






























Template Conservation       
     

 
 

 

      

 ..  


 
 
              
  

    

 

 
         
Template Sequence  MGEDWFLDFRVLGRGGFGEVFACQMKATGK. . LYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTD
Template Known Secondary structure 

GGG
SSSTTT

..TT



TTB


SS
Template Predicted Secondary structure 













..









Template SS confidence 















































































   182.......190.........200.........210. ........220.........230.........240.........250.........
 
   189190.........200..... ....210.........220.........230.........240......... 250.........260...
Predicted Secondary structure 





....


























.








Query SS confidence 
















. . . .











































.













Query Sequence  LLVVMELVPGGALDKYL. . . . QKNSSVQWPEKLDIIAQVAAGLAYIHSKNIIHRDIAARNILYGK. GVAKVSDFGLSRVG
Query Conservation    

 
    
 
    ....                 
   
  

     
 


  
     .   

 




   
Alig confidence 
















....











































.













Template Conservation    

 
   

 
   
         
 
        

  

  

   







 



      

 




   
Template Sequence  LCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVEL
Template Known Secondary structure 


TTS
SSS
S

TT




GGG
TTS



TT

Template Predicted Secondary structure 
































Template SS confidence 















































































   260.........270.........280.........290.........300.........310.........320.........330.........
 
   264.....270. ........280.........290.........300.........310...... ...320.........330........
Predicted Secondary structure 







.






















....











Query SS confidence 







.












































. . . .





















Query Sequence  TEYQMDPS. KRVPIRWLSPETIVSFLYTPQTDVFAFSILCWEVIENGAQPYPEM. . . . LVVQVHQKVGRDDYRMPISQKA
Query Conservation          .      
 


          






  
 

 
 
  
    ....        
             
Alig confidence 







.



































.







....













..





Template Conservation             

  
 


           






 
 


 .
  

           
   
     ..  
   
Template Sequence  KAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIA. ARGPFRARGEKVENKELKQRVLEQAV. . TYPDKF
Template Known Secondary structure 
TT


B



S
TTTS
TT

B
T.SS
SSS
TT






..


TTS
Template Predicted Secondary structure 























.

















..





Template SS confidence 















































































   340.........350.........360.........370.........380.... .....390.........400.........410 ......
 
   339340.........350........ .360.....
Predicted Secondary structure 






.....
Query SS confidence 



















. . . . .






Query Sequence  PAMLADVIKKCWIRDPQQRP. . . . . TMSQVVQ
Query Conservation     
  

  

  

  

.....
   
  
Alig confidence 



















.....






Template Conservation 
    


  

  

  


        
  
Template Sequence  SPASKDFCEALLQKDPEKRLGFRDGSCDGLRT
Template Known Secondary structure 
S
SSGGGS


BTTBSTTGGG
Template Predicted Secondary structure 












Template SS confidence 































   417..420.........430.........440........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D