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Job DescriptionQ20933
Confidence100.00%DateFri May 3 21:32:28 BST 2013
Rank173Aligned Residues244
% Identity20%Templatec3i6wB_
PDB info PDB header:transferaseChain: B: PDB Molecule:serine/threonine-protein kinase chk2; PDBTitle: structure and activation mechanism of the chk2 dna-damage checkpoint2 kinase
Resolution3.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   104.....110.........120.........130.........140.........150.........160.........170.........180...
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Query Sequence  GRQSWELNHADITMTKVLGEGAFGEVKLGTLKMGSTTVDVAIKVAKLEKVTKEQIKEIITEARLMRGFDHKNVVKCYGVA
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Template Sequence  LTVDDQSVYPKALRDEYIMSKTLGEVKLAFERKTCK. . KVAIRIISKLN. . . . . . . . VETEIEILKKLNHPCIIKIKNFF
Template Known Secondary structure  SSSS
GGGS



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   204.....210.........220.........230......... 240.........250 .........260.........270...
 
   184.....190.........200.........210.........220.........230.........240....... ..250.........
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Query Sequence  AIDEPLLVVMELVPGGALDKYLQKNSSVQWPEKLDIIAQVAAGLAYIHSKNIIHRDIAARNILY. . . . GKGVAKVSDFGL
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Template Sequence  DAED. YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGH
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   293... ...300.........310.........320.........330.........340.........350.........360.........370.
 
   260.........270.........280.........290.........300.........310..... ....320.........330..... .
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Query Sequence  SRVGTEYQMDPSKRVPIRWLSPETIVSFLYTPQTDVFAFSILCWEVIENGAQPYPE. MLVVQVHQKVGRDDYRMPIS. . Q
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Template Sequence  SKILG. . . . . . ETSLMRPTYLAPEVLVAGYNRAVDCWSLGVILFICLS. GYPPFSEHRTQVSLKDQITSGKYNFIPEVWA
Template Known Secondary structure  STT......
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   372.... ...380.........390.........400.........410... ......420.........430.........440....
 
   337..340.........350.........360.....
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Query Sequence  KAPAMLADVIKKCWIRDPQQRPTMSQVVQ
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Template Sequence  EVSEKALDLVKKLLVVDPKARFTTEEALR
Template Known Secondary structure  TS
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SSTTTS

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   454.....460.........470.........480..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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