Return to main results Retrieve Phyre Job Id

Job DescriptionQ20933
Confidence100.00%DateFri May 3 21:32:28 BST 2013
Rank249Aligned Residues256
% Identity20%Templatec3kmuA_
PDB info PDB header:cell adhesionChain: A: PDB Molecule:integrin-linked kinase; PDBTitle: crystal structure of the ilk/alpha-parvin core complex (apo)
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   108.110.........120.........130.........140.........150.........160.........170.........180.......
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Query Sequence  WELNHADITMTKVLGEGAFGEVKLGTLKMGSTTVDVAIKVAKLEKVTKEQIKEIITEARLMRGFDHKNVVKCYGVAAIDE
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Template Sequence  SGIDFKQLNFLTKLNENHSGELWKGRW. . . . QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPP
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GGG
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   186...190.........200.........210.. .......220.........230.........240.........250.........260.
 
   188 .190.........200..... ....210.........220.........230.... .....240..... ....250.........260
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Query Sequence  P. . LLVVMELVPGGALDKYL. . QKNSSVQWPEKLDIIAQVAAGLAYIHSKN. . IIHRDIAARNI. LYGKGVAKVSDFGLS
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Template Sequence  APHPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXARGXAFLHTLEPLIPRHALNSRSVXIDEDXTARISXADVK
Template Known Secondary structure  SSS


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   262.......270.........280.........290.........300.........310.........320.........330.........340.
 
   261........270.........280......... 290.........300.........310.........320.........330.......
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Query Sequence  RVGTEYQMDPSKRVPIRWLSPETIVSFLY. . . TPQTDVFAFSILCWEVIENGAQPYPEMLVVQVHQKVGRDDYRMPISQK
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Template Sequence  FSFQSPGRXYAPA. . . . WVAPEALQKKPEDTNRRSADXWSFAVLLWELVT. REVPFADLSNXEIGXKVALEGLRPTIPPG
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   342.......350.... .....360.........370.........380....... ..390.........400.........410......
 
   338.340.........350.........360.........370..
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Query Sequence  APAMLADVIKKCWIRDPQQRPTMSQVVQMMYEITG
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Template Sequence  ISPHVSKLXKICXNEDPAKRPKFDXIVPILEKXQD
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   417..420.........430.........440.........450.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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