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Job DescriptionQ20933
Confidence100.00%DateFri May 3 21:32:28 BST 2013
Rank215Aligned Residues224
% Identity24%Templatec3a60B_
PDB info PDB header:transferaseChain: B: PDB Molecule:ribosomal protein s6 kinase beta-1; PDBTitle: crystal structure of unphosphorylated p70s6k1 (form i)
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   109110.........120.........130..... ....140.........150.........160.........170.........180.......
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Query Sequence  ELNHADITMTKVLGEGAFGEVKLGTLK. MGSTTVDVAIKVAKLEKVTKEQIKEIITEARLMRGFDHKNVVKCYGVAAIDE
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Template Sequence  KIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLK. . . . . . . . . . . . . . . . . . . . . KKHPFIVDLIYAFQTGG
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   85....90.........100.........110.........120...... ...130.........140...
 
   188.190.........200.........210.........220.........230.........240..... ....250.........260......
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Query Sequence  PLLVVMELVPGGALDKYLQKNSSVQWPEKLDIIAQVAAGLAYIHSKNIIHRDIAARNI. LYGKGVAKVSDFGLSRVGTEY
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Template Sequence  KLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCK. . . . .
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   167..170.........180.........190.........200.........210.........220.........230.........240.
 
   267..270.........280.........290.........300.........310.........320.........330.........340......
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Query Sequence  QMDPSKRVPIRWLSPETIVSFLYTPQTDVFAFSILCWEVIENGAQPYPEMLVVQVHQKVGRDDYRMPISQKAPAMLADVI
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Template Sequence  . . . . ESCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLT. GAPPFTGENRKKTIDKILKCKL. . NLPPYLTQEARDLL
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   242.......250.........260.........270........ .280.........290.........300 .........310....
 
   347..350......... 360.....
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Query Sequence  KKCWIRDPQQRPT. . . . . MSQVVQ
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Template Sequence  KKLLKRNAASRLGAGPGDAGEVQA
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TTTSTT
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   325....330.........340........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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