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Job DescriptionQ20933
Confidence100.00%DateFri May 3 21:32:28 BST 2013
Rank206Aligned Residues225
% Identity24%Templatec2z7qA_
PDB info PDB header:transferaseChain: A: PDB Molecule:ribosomal protein s6 kinase alpha-1; PDBTitle: crystal structure of the n-terminal kinase domain of human rsk-1 bound2 to amp-pcp
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   109110.........120.........130.... .....140.........150.........160.........170.........180.......
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Query Sequence  ELNHADITMTKVLGEGAFGEVKLGTL. KMGSTTVDVAIKVAKLEKVTKEQIKEIITEARLMRGFDHKNVVKCYGVAAIDE
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Template Sequence  KADPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVL. . . . . . . . . . . . . . . . . . ILADVNHPFVVKLHYAFQTEG
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GGGTT
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   56...60.........70.........80.........90...... ...100.........110.......
 
   188.190.........200.........210.........220.........230.........240..... ....250.........260......
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Query Sequence  PLLVVMELVPGGALDKYLQKNSSVQWPEKLDIIAQVAAGLAYIHSKNIIHRDIAARNI. LYGKGVAKVSDFGLSRVGTEY
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Template Sequence  KLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEG. . .
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   136...140.........150.........160.........170.........180.........190.........200.........210..
 
   267..270.........280.........290.........300.........310.........320.........330.........340......
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Query Sequence  QMDPSKRVPIRWLSPETIVSFLYTPQTDVFAFSILCWEVIENGAQPYPEMLVVQVHQKVGRDDYRMPISQKAPAMLADVI
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Template Sequence  . . . . . . . . TVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLT. GSLPFQGKDRKETMTLILKAKL. . GMPQFLSTEAQSLL
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   225....230.........240.........250....... ..260.........270......... 280.........290...
 
   347..350....... ..360.....
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Query Sequence  KKCWIRDPQQR. . . . . PTMSQVVQ
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Template Sequence  RALFKRNPANRLGSGPDGAEEIKR
Template Known Secondary structure 

SSTTTSTTSSSSTT
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   294.....300.........310.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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