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Job DescriptionQ20933
Confidence100.00%DateFri May 3 21:32:28 BST 2013
Rank104Aligned Residues265
% Identity31%Templatec3cc6A_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein tyrosine kinase 2 beta; PDBTitle: crystal structure of kinase domain of protein tyrosine kinase 2 beta2 (ptk2b)
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   106...110.........120.........130...... ...140.........150.........160.........170.........180....
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Query Sequence  QSWELNHADITMTKVLGEGAFGEVKLGTLKM. GSTTVDVAIKVAKLEKVTKEQIKEIITEARLMRGFDHKNVVKCYGVAA
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Template Sequence  PQYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKK. DCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIE
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   416...420.........430.........440.........450.........460. ........470.........480.........490....
 
   185....190.........200..... ....210.........220.........230.........240..... ....250.........260..
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Query Sequence  IDEPLLVVMELVPGGALDKYL. QKNSSVQWPEKLDIIAQVAAGLAYIHSKNIIHRDIAARNI. LYGKGVAKVSDFGLSRV
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Template Sequence  EEP. TWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRY
Template Known Secondary structure  SSS.


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   495.. ..500.........510.........520.........530.........540.........550.........560.........570...
 
   263......270.........280.........290.........300.........310.........320.........330.........340..
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Query Sequence  GTEYQMDPSKRVPIRWLSPETIVSFLYTPQTDVFAFSILCWEVIENGAQPYPEMLVVQVHQKVGRDDYRMPISQKAPAML
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Template Sequence  I. . . . . . . VTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGD. RLPKPDLCPPVL
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   574 .....580.........590.........600.........610.........620.........630... ......640.....
 
   343......350.........360.........370.........380
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Query Sequence  ADVIKKCWIRDPQQRPTMSQVVQMMYEITGKKDKTSVN
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Template Sequence  YTLMTRCWDYDPSDRPRFTELVCSLSDVYQMEKDIAME
Template Known Secondary structure  T
SSGGGS


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   655....660.........670.........680.........690..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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