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Job DescriptionQ20933
Confidence100.00%DateFri May 3 21:32:28 BST 2013
Rank55Aligned Residues262
% Identity34%Templatec3kulB_
PDB info PDB header:transferaseChain: B: PDB Molecule:ephrin type-a receptor 8; PDBTitle: kinase domain of human ephrin type-a receptor 8 (epha8)
Resolution2.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   109110.........120.........130......... 140.........150.........160.........170.........180.......
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Query Sequence  ELNHADITMTKVLGEGAFGEVKLGTLKMGST. TVDVAIKVAKLEKVTKEQIKEIITEARLMRGFDHKNVVKCYGVAAIDE
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Template Sequence  EIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY. TERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGR
Template Known Secondary structure  B

GGGTTTTT
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TT


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   629630.........640.........650.........660.........670... ......680.........690.........700.......
 
   188.190.........200......... 210.........220.........230.........240..... ....250.........260.. .
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Query Sequence  PLLVVMELVPGGALDKYLQKNS. SVQWPEKLDIIAQVAAGLAYIHSKNIIHRDIAARNI. LYGKGVAKVSDFGLSRV. . G
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Template Sequence  LAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLED
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TT
BTSTT
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S

SGGG
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   708.710.........720.........730.........740.........750.........760.........770.........780.......
 
   264.....270.........280.........290.........300.........310.........320.........330.........340...
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Query Sequence  TEYQMDPSKRVPIRWLSPETIVSFLYTPQTDVFAFSILCWEVIENGAQPYPEMLVVQVHQKVGRDDYRMPISQKAPAMLA
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Template Sequence  DPDAATTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEE. GYRLPAPMGCPHALH
Template Known Secondary structure  STT








GGGS




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   788.790.........800.........810.........820.........830.........840.........850. ........860......
 
   344.....350.........360.........370..
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Query Sequence  DVIKKCWIRDPQQRPTMSQVVQMMYEITG
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Template Sequence  QLMLDCWHKDRAQRPRFSQIVSVLDALIR
Template Known Secondary structure  T
SSGGGS

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   869870.........880.........890.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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