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Job DescriptionQ20933
Confidence100.00%DateFri May 3 21:32:28 BST 2013
Rank20Aligned Residues260
% Identity34%Templatec3dpkA_
PDB info PDB header:transferaseChain: A: PDB Molecule:macrophage colony-stimulating factor 1 receptor; PDBTitle: cfms tyrosine kinase in complex with a pyridopyrimidinone2 inhibitor
Resolution1.95 Å
Model Dimensions (Å)X: Y: Z:

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   106...110.........120.........130.........140.........150.........160.........170. ........180....
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Query Sequence  QSWELNHADITMTKVLGEGAFGEVKLGTLKMGSTTVDVAIKVAKLEKVTKEQIKEIITEARLMRGF. DHKNVVKCYGVAA
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Template Sequence  EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGAVLKVAVKMLKST. AHADEKEALMSELKIMSHLGQHENIVNLLGACT
Template Known Secondary structure  GGGB

GGG
SSS



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TTB


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   573......580.........590.........600.........610........ .620.........630.........640.........650.
 
   185....190.........200.........210.........220.........230.........240..... ....250.........260...
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Query Sequence  IDEPLLVVMELVPGGALDKYLQKNSSVQWPEKLDIIAQVAAGLAYIHSKNIIHRDIAARNI. LYGKGVAKVSDFGLSRVG
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Template Sequence  HGGPVLVITEYCCYGDLLNFLRR. . QLSSRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI
Template Known Secondary structure  SSSS


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SGGGGGG


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G
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   655....660.........670....... ..680.........690.........700.........710.........720.........730..
 
   264.....270.........280.........290.........300.........310.........320.........330.........340...
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Query Sequence  TEYQMDPSKRVPIRWLSPETIVSFLYTPQTDVFAFSILCWEVIENGAQPYPEMLVVQVHQKVGRDDYRMPISQKAPAMLA
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Template Sequence  MNDS. NYIVRLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIY
Template Known Secondary structure  GG
T.TSB

B
GGGS




TTS

SSTT

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   804... ..810.........820.........830.........840.........850.........860.........870.........880..
 
   344.....350.........360.........
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Query Sequence  DVIKKCWIRDPQQRPTMSQVVQMMYE
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Template Sequence  SIMQACWALEPTHRPTFQQICSFLQE
Template Known Secondary structure  T
SSGGGS


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   887..890.........900.........910..
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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