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Job DescriptionQ20933
Confidence96.59%DateFri May 3 21:32:28 BST 2013
Rank436Aligned Residues133
% Identity21%Templatec3c5iD_
PDB info PDB header:transferaseChain: D: PDB Molecule:choline kinase; PDBTitle: crystal structure of plasmodium knowlesi choline kinase, pkh_134520
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   110.........120.........130....... ..140.........150.........160.........170. ........180..
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Query Sequence  LNHADITMTKVLGEGAFGEVKLGTLKMG. . . . . . STTVDVAIKVAKLEKVTKEQIKEIITEARLMRGF. DHKNVVKCYGV
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Template Sequence  FTEDNLRVKQI. . . LLTNQLFEVGLKEETANNYNSIRTRVLFRIYGK. . . HVDELYNTISEFEVYKTMSKYKIAPQLLNT
Template Known Secondary structure 

GGG...


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T...TGGGTS
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   31........40. ........50.........60.........70.... .....80.........90.........100....
 
   183......190.........200.........210.........220.........230.
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Query Sequence  AAIDEPLLVVMELVPGGALDKYLQKNSSVQWPEKLDIIAQVAAGLAYIH. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  FNG. . . . GRIEEWLYGDPLRIDDLKNP. . . . . . . . TILIGIANVLGKFHTLSRKRHLPEHWDRTPCIFKMMEKWKNQLFK
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GGGGG
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TT
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   107.. 110.........120......... 130.........140.........150.........160.........170....
 
   232.......240.........250.........260
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . SKNIIHRDIAARNILYGKGVAKVSDFGLS
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Template Sequence  YKNIEKYNCDIHKYIKESDKFIKFMKVYSKSDNLANTIVFCHNDLQENNIINTNKCLRLIDFEYS
Template Known Secondary structure  STTGGGT
SSTTS

GGG

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TT
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   175....180.........190.........200.........210.........220.........230.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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