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Job DescriptionQ20933
Confidence100.00%DateFri May 3 21:32:28 BST 2013
Rank280Aligned Residues223
% Identity26%Templatec3alnB_
PDB info PDB header:transferaseChain: B: PDB Molecule:dual specificity mitogen-activated protein kinase kinase 4; PDBTitle: crystal structure of human non-phosphorylated mkk4 kinase domain2 complexed with amp-pnp
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   104.....110.........120.........130.........140.........150.........160.........170.........180...
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Query Sequence  GRQSWELNHADITMTKVLGEGAFGEVKLGTLKMGSTTVDVAIKVAKLEKVTKEQIKEIITEARLMRGFDHKNVVKCYGVA
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Template Sequence  PEQHWDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQ. . IMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGAL
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   91........100.........110.........120...... ...130.........140.........150.........160........
 
   184.....190.........200...... ...210.........220.........230... ......240..... ....250.......
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Query Sequence  AIDEPLLVVMELVPGGALDKYLQ. . . . KNSSVQWPEKLDIIAQVAAGLAYIHSK. NIIHRDIAARNI. LYGKGVAKVSDF
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Template Sequence  FREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDF
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   169170.........180.........190.........200.........210.........220.........230.........240........
 
   258.260.........270.........280.........290.........300.........310.........320.........330.......
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Query Sequence  GLSRVGTEYQMDPSKRVPIRWLSPETIVSFLYTPQTDVFAFSILCWEVIENGAQPYPEMLVVQVHQKVGRDDYRMPISQK
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Template Sequence  GIS. . . . . . . . . . . . . . . . . . . . . . . . . GQLYDVRSDVWSLGITLYELAT. GRFPYPDPP. . . . . . . . . . . QLSNSEERE
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   249250. ........260.........270... ......280.. .......290.
 
   338.340.........350.........360.....
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Query Sequence  APAMLADVIKKCWIRDPQQRPTMSQVVQ
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Template Sequence  FSPSFINFVNLCLTKDESKRPKYKELLK
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   336...340.........350.........360...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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