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Job DescriptionQ20933
Confidence100.00%DateFri May 3 21:32:28 BST 2013
Rank29Aligned Residues251
% Identity22%Templatec3c4yA_
PDB info PDB header:transferaseChain: A: PDB Molecule:rhodopsin kinase; PDBTitle: crystal structure of apo form of g protein coupled receptor kinase 12 at 7.51a
Resolution7.51 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   110.........120.........130.........140.........150.. .......160.........170.........180........
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Query Sequence  LNHADITMTKVLGEGAFGEVKLGTLKMGSTTVDVAIKVAKLEK. VTKEQIKEIITEARLMRGFDHKNVVKCYGVAAIDEP
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Template Sequence  MGEDWFLDFRVLGRGGFGEVFACQMKATGK. . LYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTD
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GGGB





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   182.......190.........200.........210. ........220.........230.........240.........250.........
 
   189190.........200..... ....210.........220.........230.........240......... 250.........260...
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Query Sequence  LLVVMELVPGGALDKYL. . . . QKNSSVQWPEKLDIIAQVAAGLAYIHSKNIIHRDIAARNILYGK. GVAKVSDFGLSRVG
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Template Sequence  LCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVEL
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   260.........270.........280.........290.........300.........310.........320.........330.........
 
   264.....270 .........280.........290.........300.........310...... ...320.........330.........340
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Query Sequence  TEYQMDP. SKRVPIRWLSPETIVSFLYTPQTDVFAFSILCWEVIENGAQPYPEM. . LVVQVHQKVGRDDYRMPISQKAPA
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Template Sequence  KAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIA. ARGPFRARGVENKELKQRVLEQAV. . TYPDKFSP
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   340.........350.........360.........370.........380.... .....390.........400........ .410......
 
   341........350....... ..360.....
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Query Sequence  MLADVIKKCWIRDPQQR. . . . . PTMSQVVQ
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Template Sequence  ASKDFCEALLQKDPEKRLGFRDGSCDGLRT
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   419420.........430.........440........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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