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Job DescriptionQ20933
Confidence100.00%DateFri May 3 21:32:28 BST 2013
Rank201Aligned Residues226
% Identity22%Templatec2onlD_
PDB info PDB header:transferaseChain: D: PDB Molecule:map kinase-activated protein kinase 2; PDBTitle: crystal structure of the p38a-mapkap kinase 2 heterodimer
Resolution4.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   115....120..... ....130.........140.........150.........160.........170. ........180..... ...
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Query Sequence  ITMTKVLGEGA. FGEVKLGTLKMGSTTVDVAIKVAKLEKVTKEQIKEIITEARLMRGF. DHKNVVKCYGVAAI. . . . DEP
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Template Sequence  VKSGLQIKKNAIIDDVLQIFNKRTQE. . KFALKMLQDC. . . . . . . PKARREVELHWRASQCPHIVRIVDVYENLYAGRKC
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   48.50.........60.........70... ......80... ......90.........100.........110........
 
   189190.........200......... 210.........220.........230.........240........ .250.........260..
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Query Sequence  LLVVMELVPGGALDKYLQKNS. . SVQWPEKLDIIAQVAAGLAYIHSKNIIHRDIAARNILYG. . . . KGVAKVSDFGLSRV
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Template Sequence  LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE
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   134.....140.........150.........160.........170.........180.........190.........200.........210...
 
   263......270.........280.........290.........300.........310.........320.........330.........340..
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Query Sequence  GTEYQMDPSKRVPIRWLSPETIVSFLYTPQTDVFAFSILCWEVIENGAQPYPEMLVVQVHQKVGRDDYRMPISQKAPAML
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Template Sequence  TTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLC. GYPPFYE. . . . . . . . . . . . . . FPNPEWSEVSEEV
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   214.....220.........230.........240.........250........ .260..... ....270........
 
   343......350.........360....
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Query Sequence  ADVIKKCWIRDPQQRPTMSQVV
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Template Sequence  KMLIRNLLKTEPTQRMTITEFM
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   299300.........310.........320
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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