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Job DescriptionQ20933
Confidence100.00%DateFri May 3 21:32:28 BST 2013
Rank260Aligned Residues238
% Identity26%Templatec3zduA_
PDB info PDB header:transferaseChain: A: PDB Molecule:cyclin-dependent kinase-like 3; PDBTitle: crystal structure of the human cdkl3 kinase domain
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   113......120.........130.........140.........150.........160.........170.........180.........190..
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Query Sequence  ADITMTKVLGEGAFGEVKLGTLKMGSTTVDVAIKVAKLEKVTKEQIKEIITEARLMRGFDHKNVVKCYGVAAIDEPLLVV
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Template Sequence  EMYETLGKVGEGSYGTVMKCKHKNTGQ. . IVAIKIFYN. . . . . . . . KIAMREIKFLKQFHHENLVNLIEVFRQKKKIHLV
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   2.......10.........20........ .30....... ..40.........50.........60.........70.
 
   193......200.........210.........220.........230.........240..... ....250.........260.........270.
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Query Sequence  MELVPGGALDKYLQKNSSVQWPEKLDIIAQVAAGLAYIHSKNIIHRDIAARNI. LYGKGVAKVSDFGLSRVGTEYQMDPS
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Template Sequence  FEFIDHTVLDELQHYCHGLESKRLRKYLFQILRAIDYLHSNNIIHRDIKPENILVSQSGITKLCDFGFARTDIYDDEVAT
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   7980.........90.........100.........110.........120.........130.........140.........150........
 
   272.......280........ .290.........300.........310.........320.........330......
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Query Sequence  KRVPIRWLSPETIVSFL. YTPQTDVFAFSILCWEVIENGAQPYPEMLVVQVHQKVGRDDYRMPISQ. . . . . . . . . . . . . .
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Template Sequence  RW. . . . YRAPELVLKDTSYGKPVDIWALGCMIIEMAT. GNPYLPSSSDLDLLHKIVLKVGNLSPHLQNIFSKSPIFAGVV
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   164. ....170.........180.........190...... ...200.........210.........220.........230........
 
   337..340.........350.........360.....
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Query Sequence  . . . . . . . . . . . . . . . KAPAMLADVIKKCWIRDPQQRPTMSQVVQ
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Template Sequence  LPQVQHPKNARKKYPKLNGLLADIVHACLQIDPADRISSSDLLH
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T
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   239240.........250.........260.........270.........280..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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