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Job DescriptionQ20933
Confidence100.00%DateFri May 3 21:32:28 BST 2013
Rank198Aligned Residues248
% Identity21%Templatec3rp9A_
PDB info PDB header:transferaseChain: A: PDB Molecule:mitogen-activated protein kinase; PDBTitle: crystal structure of the apo mapk from toxoplasma gondii, 25.m01780 or2 tgme49_007820
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   104.....110.........120.........130.........140.........150.........160.........170.........180...
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Query Sequence  GRQSWELNHADITMTKVLGEGAFGEVKLGTLKMGSTTVDVAIKVAKLEKVTKEQIKEIITEARLMRGFDHKNVVKCYGVA
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Template Sequence  PHSDWQI. PDRYEIRHLHVCEAYDKLRV. . . . . . . . . . . VAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIV
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   45....50. ........60.........70. ........80.........90.........100.........110..
 
   184.....190.........200.........210.........220.........230.........240..... ....250.......
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Query Sequence  . . . . . AIDEPLLVVMELVPGGALDKYLQKNSSVQWPEKLDIIAQVAAGLAYIHSKNIIHRDIAARNI. LYGKGVAKVSDF
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Template Sequence  IPKDVEKFDELYVVLEIADSD. FKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDF
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   122.......130.........140.. .......150.........160.........170.........180.........190.........200
 
   258.260. ........270.........280........ .290.........300.........310........
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Query Sequence  GLSR. VGTEYQMDPSKRVPIRWLSPETIVSFL. YTPQTDVFAFSILCWEVIENGAQPYPEMLV. . . . . . . . . . . . . . . . .
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Template Sequence  GLARTVDYPENGNSQLPVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN. MIKENVAYHADRGPLFPTRGNRDQLNV
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   201........210.........220.........230.........240.........250.. .......260.........270.........
 
   319320.........330...... ...340.........350.........360.....
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Query Sequence  . . . . . . . . . . . . . . . . . VQVHQKVGRDDYRMPISQ. . . . . . KAPAMLADVIKKCWIRDPQQRPTMSQVVQ
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Template Sequence  IFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLA
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   327..330.........340.........350.........360.........370.........380.........390......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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