Return to main results Retrieve Phyre Job Id

Job DescriptionQ20933
Confidence100.00%DateFri May 3 21:32:28 BST 2013
Rank62Aligned Residues265
% Identity28%Templatec3plsA_
PDB info PDB header:transferaseChain: A: PDB Molecule:macrophage-stimulating protein receptor; PDBTitle: ron in complex with ligand amp-pnp
Resolution2.24 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   106...110........ .120.........130......... 140.........150.........160.........170.........180..
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Query Sequence  QSWELNHADITMT. . KVLGEGAFGEVKLGTLKMGST. TVDVAIKVAKLEKVTKEQIKEIITEARLMRGFDHKNVVKCYGV
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Template Sequence  KDVLIPHERVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRIT. EMQQVEAFLREGLLMRGLNHPNVLALIGI
Template Known Secondary structure  GGGB

GGGTT
SSS
TT

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TTB



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   1071........1080.........1090.........1100.........1110.........1120 .........1130.........1140.........
 
   183. .....190.........200......... 210.........220.........230.........240..... ....250.........
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Query Sequence  AA. IDEPLLVVMELVPGGALDKYLQKNS. SVQWPEKLDIIAQVAAGLAYIHSKNIIHRDIAARNI. LYGKGVAKVSDFGL
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Template Sequence  MLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGL
Template Known Secondary structure 

SSS




TT
B
TT


BTT


S

SGGG
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TTS
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   1150.........1160.........1170.........1180.........1190.........1200.........1210.........1220.........
 
   260... ......270.........280.........290.........300.........310.........320.........330....
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Query Sequence  SRVG. . . . . TEYQMDPSKRVPIRWLSPETIVSFLYTPQTDVFAFSILCWEVIENGAQPYPEMLVVQVHQKVGRDDYRMPI
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Template Sequence  ARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGR. RLPQ
Template Known Secondary structure  S
TTTTGGGG
S

SS
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GGGGS
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TS

TTTTS
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   1230.........1240.........1250.........1260.........1270.........1280.........1290.........1300.... ....
 
   335....340.........350.........360.........370..
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Query Sequence  SQKAPAMLADVIKKCWIRDPQQRPTMSQVVQMMYEITG
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Template Sequence  PEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVS
Template Known Secondary structure 
TT

T
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   13091310.........1320.........1330.........1340......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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