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Job DescriptionQ20933
Confidence100.00%DateFri May 3 21:32:28 BST 2013
Rank194Aligned Residues251
% Identity23%Templatec3hkoA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calcium/calmodulin-dependent protein kinase with a kinase PDBTitle: crystal structure of a cdpk kinase domain from cryptosporidium parvum,2 cgd7_40
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   112.......120.........130.........140.........150.........160.........170.........180.........190.
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Query Sequence  HADITMTKVLGEGAFGEVKLGTLKMGSTTVDVAIKVAKLEKVTKEQIKEIITEARLMRGFDHKNVVKCYGVAAIDEPLLV
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Template Sequence  QKKYHLKGAIGQGSYGVVRVAIENQTRA. . IRAIKIMNKNKIRQKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICL
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   7..10.........20.........30.... .....40.........50.........60.........70.........80....
 
   192.......200.........210 .........220.........230...
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Query Sequence  VMELVPGGALDKYLQKNSS. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . VQWPEKLDIIAQVAAGLAYIHSK
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Template Sequence  VMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIFRESLDFVQREKLISNIMRQIFSALHYLHNQ
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   88.90.........100.........110.........120.........130.........140.........150.........160.......
 
   234.....240.........250.........260.........270.........280...... ...290.........300.........310.
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Query Sequence  NIIHRDIAARNILYGKGVAKVSDFGLSRVGTEYQMDPSKRVPIRWLSPETIVS. . FLYTPQTDVFAFSILCWEVIENGAQ
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Template Sequence  GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLM. GAV
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   170.........180.........190.........200.........210.........220.........230.........240..... ...
 
   312.......320.........330..... ....340.........350.........360.....
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Query Sequence  PYPEMLVVQVHQKVGRDDYRMPIS. . QKAPAMLADVIKKCWIRDPQQRPTMSQVVQ
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Template Sequence  PFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQ
Template Known Secondary structure  SS

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TTSGGGGGS
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   257..260.........270.........280.........290.........300.........310..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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