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Job DescriptionQ20933
Confidence100.00%DateFri May 3 21:32:28 BST 2013
Rank220Aligned Residues270
% Identity9%Templatec2jiiA_
PDB info PDB header:transferaseChain: A: PDB Molecule:serine/threonine-protein kinase vrk3 molecule: vaccinia PDBTitle: structure of vaccinia related kinase 3
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   110.........120.........130.........140.........150.........160.. .......170.........180.
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Query Sequence  LNHADITMTKVLGEGAFGEVKLGTLKMGSTTVDVAIKVAKLEKVTKEQIKEII. . . . . . . . TEARLMRGFDHKNVVKCYG
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Template Sequence  KSGRQWKLKSFQTRDNQGILYEAAPTSK. . . . . FSLKLDAKDGRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIPTCMG
Template Known Secondary structure  TTS
TT


.....TTST

TT
TT
S




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   161........170.........180........ .190.........200.........210.........220.........230.....
 
   182...... .190.........200.........210 .........220.........230.........240.........250 .....
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Query Sequence  VAAIDEP. LLVVMELVPGGALDKYLQKNSS. . VQWPEKLDIIAQVAAGLAYIHSKNIIHRDIAARNILYGKG. . . VAKVS
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Template Sequence  FGVHQDKYRFLVLPSL. GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFVDPEDQSQVTLA
Template Known Secondary structure  TTT

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SGGG


TT
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S


GGGTT
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   247..250.........260.. .......270.........280.........290.........300.........310.........320.....
 
   256...260.........270.. .......280.........290.........300.........310.........320.......
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Query Sequence  DFGLSRVGTEYQMDPSK. . . . . . . . RVPIRWLSPETIVSFLYTPQTDVFAFSILCWEVIENGAQPYPEMLVVQVHQKVGR
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Template Sequence  GYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLY. GFLPWTNCLPNTEDIMKQK
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GGG
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SSGGG





TTSS
TT
S
TTT

TT



.S

TTGGGTT
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   326...330.........340.........350.........360.........370.........380..... ....390.........400....
 
   328. 330.........340.........350.........360.........370.........380......
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Query Sequence  DD. . . . . . . . . YRMPISQKAPAMLADVIKKCWIRDPQQRPTMSQVVQMMYEITGKKDKTSVNKSTGQL
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Template Sequence  QKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLRVSPYDPIGLPM
Template Known Secondary structure  S



TTS



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   405....410.........420.........430.........440.........450.........460.........470..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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