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Job DescriptionQ20933
Confidence100.00%DateFri May 3 21:32:28 BST 2013
Rank183Aligned Residues261
% Identity13%Templatec3q60A_
PDB info PDB header:transferaseChain: A: PDB Molecule:rop5b; PDBTitle: crystal structure of virulent allele rop5b pseudokinase domain bound2 to atp
Resolution1.72 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  ADITMTKVLGEGAFGEVKLGTLKMGSTTVDVAIKVAKLEKVTKEQ. IKEIITEARLMRGFDHKNVVKCYGVAA. . . . . . .
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Template Sequence  RKLKLVEPLRVGDRSVVFLVRDVERLE. . DFALKVFTMGAENSRSELERLHEATFAAARLLGRLLLPSDAVAVQSQPPFA
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   232.......240.........250........ .260.........270.........280.........290.........300.........
 
   185....190.........200...... ...210.........220.........230.........240......... 250
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Query Sequence  . . . . . . IDEPLLVVMELVPGGALDKYLQ. . . . . . . KNSSVQWPEKLDIIAQVAAGLAYIHSKNIIHRDIAARNILYGK. G
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Template Sequence  QLSPGYAVANYLLLMPAA. SVDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIMPDG
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   320.........330....... ..340.........350.........360.........370.........380.........390........
 
   251........260.........270.........280.........290.........300.........310... ......320...
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Query Sequence  VAKVSDFGLSRVGTEYQMDPSKRVPIRWLSPETIVSFLYTPQTDVFAFSILCWEVIENGAQPY. . . . . . . PEMLVVQVHQ
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Template Sequence  RLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWC. LFLPFGLVTPGIKGSWKRPSLR
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GGGTT
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   402.......410.........420.........430.........440.........450........ .460.........470.........480
 
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Query Sequence  KVGRDDYRMPISQKAPAMLADVIKKCWIRDPQQRPTMSQVVQ. . MMYEITGKKDKT
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Template Sequence  VPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQLQNEISSS
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   481........490.........500.........510.........520.........530......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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