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Job DescriptionQ20933
Confidence99.93%DateFri May 3 21:32:28 BST 2013
Rank317Aligned Residues149
% Identity14%Templatec1zp9A_
PDB info PDB header:transferaseChain: A: PDB Molecule:rio1 kinase; PDBTitle: crystal structure of full-legnth a.fulgidus rio1 serine kinase bound2 to atp and mn2+ ions.
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   115....120.........130.........140.........150.. .......160.........170.........180...
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Query Sequence  ITMTKVLGEGAFGEVKLGTLKMGSTTVDVAIKVAKLEK. . . . . . . . . . . VTKEQIKEIITEARLMRGFDHKNVVKCYGVA
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Template Sequence  TAXGGVISTGKEANVFYADGVFDGKPVAXAVKIYRIXDEYLYGDERFDXPKEKVFIWTEKEFRNLERAKEAGVSVPQPYT
Template Known Secondary structure 
SSTT


GGGTTT
TTS


TT




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   4950.........60.........70.........80.........90.........100.........110.........120........
 
   184.....190.........200..... ....210.........220.........230 .........240.........250.........260
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Query Sequence  AIDEPLLVVMELVPGGALDKYL. . QKNSSVQWPEKLDIIAQVAAGLAYI. HSKNIIHRDIAARNILYGKGVAKVSDFGLS
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Template Sequence  YXKN. . VLLXEFIGEDELPAPTLVELGRELKELDVEGIFNDVVENVKRLYQEAELVHADLSEYNIXY. IDKVYFIDXGQA
Template Known Secondary structure  TT..

TT

BGGGGGGS
TS

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STTS.SSS


TT
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   140... ......150.........160.........170.........180.........190.........200.... .....210......
 
   261.....
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Query Sequence  RVGTEY
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Template Sequence  VTLRHP
Template Known Secondary structure  TTST
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   217..220..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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