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Job DescriptionQ20933
Confidence100.00%DateFri May 3 21:32:28 BST 2013
Rank209Aligned Residues244
% Identity23%Templatec3kvwA_
PDB info PDB header:transferaseChain: A: PDB Molecule:dual specificity tyrosine-phosphorylation-regulated kinase PDBTitle: crystal structure of dual-specificity tyrosine phosphorylation2 regulated kinase 2 (dyrk2) in complex with an indirubin ligand
Resolution2.28 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   112.......120.........130.........140.........150.........160.........170... ......180.....
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Query Sequence  HADITMTKVLGEGAFGEVKLGTLKMGSTTVDVAIKVAKLEKVTKEQIKEIITEARLMRGFDH. . . . . . KNVVKCYGVAAI
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Template Sequence  AYRYEVLKVIGKGSFGQVVKAYDHKVHQ. . HVALKMVR. . . NEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTF
Template Known Secondary structure  TTTSSSTTTT..
...S
TT
TTS
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B

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   146...150.........160.........170... ......180. ........190.........200.........210.........220
 
   186...190.........200.........210 .........220.........230.........240.........250. ........260
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Query Sequence  DEPLLVVMELVPGGALDKYLQKNSS. . VQWPEKLDIIAQVAAGLAYIHSKNIIHRDIAARNILYGKGV. . . AKVSDFGLS
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Template Sequence  RNHICMTFELL. SMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSS
Template Known Secondary structure  TT


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BTTT



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SGGGSSTTS




TT
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   221........230. ........240.........250.........260.........270.........280.........290.........
 
   261........270.........280.........290.........300.........310.........320.........330...
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Query Sequence  RVGTEYQMDPSKRVPIRWLSPETIVSFLYTPQTDVFAFSILCWEVIENGAQPYPEMLVVQVHQKVGRDDYRMP. . . . . . .
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Template Sequence  CYEHQRVYTIQSRF. . . YRAPEVILGARYGMPIDMWSLGCILAELLT. GYPLLPGEDEGDQLACMIELLGMPSQKLLDAS
Template Known Secondary structure  TT







GG...G

TB


T.SS
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   300.........310... ......320.........330.........340... ......350.........360.........370.....
 
   334.....340.........350.........360.....
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ISQKAPAMLADVIKKCWIRDPQQRPTMSQVVQ
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Template Sequence  KRAKNFVSKGYPRYCTVTTLSDVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALR
Template Known Secondary structure  TTB



BTTS








TT


STT
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TTT


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   377..380.........390.........400.........410.........420.........430.........440.........450.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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