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Job DescriptionQ20933
Confidence97.94%DateFri May 3 21:32:28 BST 2013
Rank422Aligned Residues135
% Identity16%Templatec3ovcA_
PDB info PDB header:transferase/antibioticChain: A: PDB Molecule:hygromycin-b 4-o-kinase; PDBTitle: crystal structure of aminoglycoside phosphotransferase aph(4)-ia
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   119120.........130.........140.........150.........160.........170..... ....180........ .190.....
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Query Sequence  KVLGEGAFGEVKLGTLKMGSTTVDVAIKVAKLEKVTKEQIKEIITEARLMRGFDHKN. . VVKCYGVAAIDEP. LLVVMEL
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Template Sequence  XQLSEGEESRAFSFDVGGR. . . . GYVLRVNSCAD. . . . . . . GFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRR
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   26...30.........40.... .....50..... ....60.........70.........80.........90....
 
   196...200.........210.........220...
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Query Sequence  VPGGALDKYLQKNSSVQWPEKLDIIAQV. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  AQGVTLQDLPETELPAVLQPVAEAXDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVXDDTVSASV
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STTTS
GGGSGGG


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B

TTSBSSGGG
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   95....100.........110.........120.........130.........140.........150.........160.........170....
 
   224.....230.........240.........250... ......260....
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Query Sequence  . . . . . . . . AAGLAYIHSKNIIHRDIAARNILYGKGVAK. VSDFGLSRVGT
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Template Sequence  AQALDELXLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAXFGD
Template Known Secondary structure  GGG





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   175....180.........190.........200.........210.........220....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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