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Job DescriptionQ20933
Confidence100.00%DateFri May 3 21:32:28 BST 2013
Rank14Aligned Residues240
% Identity25%Templatec3qa8A_
PDB info PDB header:immune system, signaling proteinChain: A: PDB Molecule:mgc80376 protein; PDBTitle: crystal structure of inhibitor of kappa b kinase beta
Resolution3.60 Å
Model Dimensions (Å)X: Y: Z:

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   116...120.........130.........140.........150.........160.........170.........180.........
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Query Sequence  TMTKVLGEGAFGEVKLGTLKMGSTTVDVAIKVAKLEKVTKEQIKEIITEARLMRGFDHKNVVKCYGVAAIDEPL. . . . . .
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Template Sequence  EMKERLGTGGFGYVLRWIHQDTGE. . QVAIKQCRQE. LSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP
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   16...20.........30......... 40......... 50.........60.........70.........80.........90..
 
   190.........200.........210 .........220.........230.........240.........250. ........260..
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Query Sequence  LVVMELVPGGALDKYLQKNSS. . . VQWPEKLDIIAQVAAGLAYIHSKNIIHRDIAARNILYGKGV. . . . AKVSDFGLSRV
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Template Sequence  LLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKE
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   93......100.........110.........120.........130.........140.........150.........160.........170..
 
   263......270.........280.........290.........300.........310.........320......
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Query Sequence  GTEYQMDPSKRVPIRWLSPETIVSFLYTPQTDVFAFSILCWEVIENGAQPYPEMLVVQVHQKVG. . . . . . . . . . . . . . . .
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Template Sequence  LDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECIT. GFRPFLPNWQPVQWHGKVRIVVYDDLTGAVKFSS
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   173......180.........190.........200.........210....... ..220.........230.........240.........250.
 
   327..330.........340.........350.........
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Query Sequence  RDDYRMPISQKAPAMLADVIKKCWIRDPQQRPT
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Template Sequence  VLPTPNHLSGILAGKLERWLQCMLMWHQRTDPQ
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   258.260.........270.........280.........290
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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