Return to main results Retrieve Phyre Job Id

Job DescriptionQ20933
Confidence100.00%DateFri May 3 21:32:28 BST 2013
Rank221Aligned Residues232
% Identity22%Templatec4g34A_
PDB info PDB header:transferase/transferase inhibitorChain: A: PDB Molecule:eukaryotic translation initiation factor 2-alpha kinase 3; PDBTitle: crystal structure of gsk6924 bound to perk (r587-r1092, delete a660-2 t867) at 2.70 a resolution
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   113......120.........130.........140.........150.........160.........170.........180....... ..190
Predicted Secondary structure 



















..
Query SS confidence 










































































. .


Query Sequence  ADITMTKVLGEGAFGEVKLGTLKMGSTTVDVAIKVAKLEKVTKEQIKEIITEARLMRGFDHKNVVKCYGVAAIDE. . PLL
Query Conservation          

 
 

 
             



                 
  

  
 
 


          ..   
Alig confidence 


























..










.

































..


Template Conservation    
     

 
 

 

      
  .. 



 
    .          
   
  
 




               
Template Sequence  TDFEPIQCLGRGGFGVVFEAKNKVDDC. . NYAIKRIRLPN. RELAREKVMREVKALAKLEHPGIVRYFNAWLEKNKVYLY
Template Known Secondary structure 
SSTTT

..
S.STT


TTB



Template Predicted Secondary structure 








..


.
















Template SS confidence 















































































   590.........600.........610...... ...620....... ..630.........640.........650.........660......
 
   191........200.........210 .........220.........230.........240..... ....250.........260......
Predicted Secondary structure 










...

















.















Query SS confidence 



















. . .


































.




















Query Sequence  VVMELVPGGALDKYLQKNSS. . . VQWPEKLDIIAQVAAGLAYIHSKNIIHRDIAARNI. LYGKGVAKVSDFGLSRVGTEY
Query Conservation 

 
    
 
         ...            
   
  

     
 


  
 .       

 




      
Alig confidence 



















...


































.













.......
Template Conservation 
  
                               
                                 
   .......
Template Sequence  IQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGL. . . . . . .
Template Known Secondary structure 


S

T

STTTS
TT






GGG
TT


S


.......
Template Predicted Secondary structure 









































.......
Template SS confidence 















































































   885....890.........900.........910.........920.........930.........940.........950.......
 
   267..270.........280.........290.........300.........310.........320.........330.........340......
Predicted Secondary structure 








































Query SS confidence 















































































Query Sequence  QMDPSKRVPIRWLSPETIVSFLYTPQTDVFAFSILCWEVIENGAQPYPEMLVVQVHQKVGRDDYRMPISQKAPAMLADVI
Query Conservation             
 


          






  
 

 
 
  
            
                
  

Alig confidence  .......

































....


































Template Conservation  .......                    





  


 
 ....                                 

Template Sequence  . . . . . . . GTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY. . . . PFSTQMERVRTLTDVRNLKFPPLFTQKYPCEYVMV
Template Known Secondary structure  .......


TTS
TT



TS....

SSTT



Template Predicted Secondary structure  .......













....

















Template SS confidence 















































































   985....990.........1000.........1010........ .1020.........1030.........1040.........1050...
 
   347..350.........360.....
Predicted Secondary structure 






Query SS confidence 


















Query Sequence  KKCWIRDPQQRPTMSQVVQ
Query Conservation    

  

  


   
  
Alig confidence 


















Template Conservation     
  

  
 
  


 
Template Sequence  QDMLSPSPMERPEAINIIE
Template Known Secondary structure  T
SSGGGS

T
Template Predicted Secondary structure 







Template SS confidence 


















   1054.....1060.........1070..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D