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Job DescriptionQ20933
Confidence100.00%DateFri May 3 21:32:28 BST 2013
Rank153Aligned Residues248
% Identity23%Templatec2i0eB_
PDB info PDB header:transferaseChain: B: PDB Molecule:protein kinase c-beta ii; PDBTitle: structure of catalytic domain of human protein kinase c2 beta ii complexed with a bisindolylmaleimide inhibitor
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   113......120.........130.........140.........150... ......160.........170. ........180.........190
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Query Sequence  ADITMTKVLGEGAFGEVKLGTLKMGSTTVDVAIKVAKLEKV. TKEQIKEIITEARLMRGF. DHKNVVKCYGVAAIDEPLL
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Template Sequence  TDFNFLMVLGKGSFGKVMLSERKGTDE. . LYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY
Template Known Secondary structure  TTTTTTSS
..T
T
TT

TTB

TT
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   340.........350.........360...... ...370.........380.........390.........400.........410.......
 
   191........200.........210.........220.........230.........240..... ....250.........260.........
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Query Sequence  VVMELVPGGALDKYLQKNSSVQWPEKLDIIAQVAAGLAYIHSKNIIHRDIAARNI. LYGKGVAKVSDFGLSRVGTEYQMD
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Template Sequence  FVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT
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S
BTTSS

TT
B



SGGG
TTS



TT
B
S

TT

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   418.420.........430.........440.........450.........460.........470.........480.........490.......
 
   270.........280.........290.........300.........310.........320.........330.........340.........
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Query Sequence  PSKRVPIRWLSPETIVSFLYTPQTDVFAFSILCWEVIENGAQPYPEMLVVQVHQKVGRDDYRMPISQKAPAMLADVIKKC
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Template Sequence  TKFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLA. GQAPFEGEDEDELFQSIMEHNV. . AYPKSMSKEAVAICKGL
Template Known Secondary structure  B


S
TTT

TT

B
T.SS
SS

SS


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TTS
S
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   498.500.........510.........520.........530..... ....540.........550....... ..560.........570....
 
   350......... 360.....
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Query Sequence  WIRDPQQRPT. . . . . MSQVVQ
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Template Sequence  MTKHPGKRLGCGPEGERDIKE
Template Known Secondary structure  S
SSGGGSTT
STTT
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   576...580.........590......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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