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Job DescriptionQ20933
Confidence100.00%DateFri May 3 21:32:28 BST 2013
Rank181Aligned Residues242
% Identity22%Templatec3qd2B_
PDB info PDB header:gene regulationChain: B: PDB Molecule:eukaryotic translation initiation factor 2-alpha kinase 3; PDBTitle: crsytal structure of mouse perk kinase domain
Resolution2.81 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   113......120.........130.........140.........150.........160.........170.........180.........
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Query Sequence  ADITMTKVLGEGAFGEVKLGTLKMGSTTVDVAIKVAKLEKVTKEQIKEIITEARLMRGFDHKNVVKCYGVAAIDEPL. . .
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Template Sequence  TDFEPIQCMGRG. FGVVFEAKNKVDDC. . NYAIKRIRLP. NRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQ
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   587..590........ .600.........610.. .......620.. .......630.........640.........650.........660..
 
   190.........200.........210 .........220.........230.........240..... ....250.....
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Query Sequence  . . . . . . . . . . LVVMELVPGGALDKYLQKNSS. . . VQWPEKLDIIAQVAAGLAYIHSKNIIHRDIAARNI. LYGKGVAKVS
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Template Sequence  EEMDEPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVG
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   664.....670.........680.........690.........700.........710.........720.........730.........740...
 
   256...260.........270.........280.........290.........300.........310.........320.........330.....
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Query Sequence  DFGLSRVGTEYQMDPSKRVPIRWLSPETIVSFLYTPQTDVFAFSILCWEVIENGAQPYPEMLVVQVHQKVGRDDYRMPIS
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Template Sequence  DFGLVTAMDQDTHGQ. . . VTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLY. SFSTQ. . MERVRIITDVRNLKFP. LLF
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   953......960....... ..970.........980.........990.........1000. ..... ...1010.........1020.. ...
 
   336...340.........350.........360.....
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Query Sequence  QKAPAMLADVIKKCWIRDPQQRPTMSQVVQ
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Template Sequence  TQKYPQEHMMVQDMLSPSPTERPEATDIIE
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   1042.......1050.........1060.........1070.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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