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Job DescriptionQ20933
Confidence100.00%DateFri May 3 21:32:28 BST 2013
Rank188Aligned Residues242
% Identity21%Templatec3dlsA_
PDB info PDB header:transferaseChain: A: PDB Molecule:pas domain-containing serine/threonine-protein kinase; PDBTitle: crystal structure of human pas kinase bound to adp
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   113......120.........130.........140.........150... ......160.........170.........180......
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Query Sequence  ADITMTKVLGEGAFGEVKLGTLKMGSTTVDVAIKVAKLEKV. . . . . . TKEQIKEIITEARLMRGFDHKNVVKCYGVAAID
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Template Sequence  QKYSTMSPLGSGAFGFVWTAVDKEKNK. . EVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ
Template Known Secondary structure 
SSSSS
STTTT..STTS
TTSTTTTT


TTB


S
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   997..1000.........1010.........1020... ......1030.........1040.........1050.........1060.........1070....
 
   187..190.........200 .........210.........220.........230.........240..... ....250.........260....
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Query Sequence  EPLLVVMELVPGGA. LDKYLQKNSSVQWPEKLDIIAQVAAGLAYIHSKNIIHRDIAARNI. LYGKGVAKVSDFGLSRVGT
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Template Sequence  GFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLE
Template Known Secondary structure  S

TTS
BT




TT
S

SGGG
TTS



TT


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   1075....1080.........1090.........1100.........1110.........1120.........1130.........1140.........1150....
 
   265....270.........280........ .290.........300.........310.........320.........330.........340...
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Query Sequence  EYQMDPSKRVPIRWLSPETIVSFL. YTPQTDVFAFSILCWEVIENGAQPYPEMLVVQVHQKVGRDDYRMPISQKAPAMLA
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Template Sequence  RGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVF. EENPFCELEE. . . . . . . . TVEAAIHPPYLVSKELM
Template Known Secondary structure  TT

B
S

S
GGG

TT

B
S.SS
S
SSGGG........GTTT



SS


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   1155....1160.........1170.........1180.........1190........ .1200........ .1210.........1220.....
 
   344.....350.........360.....
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Query Sequence  DVIKKCWIRDPQQRPTMSQVVQ
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Template Sequence  SLVSGLLQPVPERRTTLEKLVT
Template Known Secondary structure  T
SSGGGS

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   1226...1230.........1240.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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