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Job DescriptionQ20933
Confidence100.00%DateFri May 3 21:32:28 BST 2013
Rank285Aligned Residues230
% Identity21%Templatec2qkrA_
PDB info PDB header:transferaseChain: A: PDB Molecule:cdc2-like cdk2/cdc28 like protein kinase; PDBTitle: cryptosporidium parvum cyclin-dependent kinase cgd5_25102 with indirubin 3'-monoxime bound
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   117..120.........130.........140.........150.........160.........170.........180.........190......
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Query Sequence  MTKVLGEGAFGEVKLGTLKMGSTTVDVAIKVAKLEKVTKEQIKEIITEARLMRGFDHKNVVKCYGVAAIDEPLLVVMELV
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Template Sequence  MEKYLEKVGEGVVYKAKD. . . . SQRIVALKRIS. . . . . . . . . . TAIREISLLKELHHPNIVSLIDVIHSECL. TLVFEFM
Template Known Secondary structure  S
B


B





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   20.........30....... ..40........ .50.........60.........70....... ..80....
 
   197..200.........210.........220.........230.........240.........250.........260.........270......
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Query Sequence  PGGALDKYLQKNSSVQWPEKLDIIAQVAAGLAYIHSKNIIHRDIAARNILYGKGVAKVSDFGLSRVGTEYQMDPSKRVPI
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Template Sequence  EKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDALKLADFGLARAFGIPVRVVTLWY. .
Template Known Secondary structure  S
TT


TT




GGG






TT
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   102.......110.........120.........130.........140.........150.........160.........170.........
 
   277..280.........290.........300.........310.........320.........330....
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Query Sequence  RWLSPETIVSFLYTPQTDVFAFSILCWEVIENGAQPYPEMLVVQVHQKVGRDDYRMPI. . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  . RAPDVLMGSKKYSTSVDIWSIGCIFAEMIT. GKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEK
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   186...190.........200.........210..... ....220.........230.........240.........250.........260...
 
   335....340.........350.........360.....
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Query Sequence  . . . . . . SQKAPAMLADVIKKCWIRDPQQRPTMSQVVQ
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Template Sequence  KPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN
Template Known Secondary structure 

STT

S
S
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T
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   264.....270.........280.........290.........300
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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