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Job DescriptionQ20933
Confidence100.00%DateFri May 3 21:32:28 BST 2013
Rank106Aligned Residues251
% Identity22%Templatec4eqmE_
PDB info PDB header:transferaseChain: E: PDB Molecule:protein kinase; PDBTitle: structural analysis of staphylococcus aureus serine/threonine kinase2 pknb
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   112.......120.........130.........140.........150... ......160.........170.........180.........190
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Query Sequence  HADITMTKVLGEGAFGEVKLGTLKMGSTTVDVAIKVAKLEKV. TKEQIKEIITEARLMRGFDHKNVVKCYGVAAIDEPLL
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Template Sequence  NERYKIVDKLGGGGMSTVYLAEDTILNI. . KVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYY
Template Known Secondary structure  TTTTTTT

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   7..10.........20.........30.... .....40.........50.........60.........70.........80....
 
   191........200.........210.........220.........230.........240..... ....250.........260.........
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Query Sequence  VVMELVPGGALDKYLQKNSSVQWPEKLDIIAQVAAGLAYIHSKNIIHRDIAARNI. LYGKGVAKVSDFGLSRVGTEYQMD
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Template Sequence  LVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIA. . . . . . . . .
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   85....90.........100.........110.........120.........130.........140.........150.....
 
   270.........280.........290.........300.........310.........320.........330.. .......340......
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Query Sequence  PSKRVPIRWLSPETIVSFLYTPQTDVFAFSILCWEVIENGAQPYPEMLVVQVHQKVGRDDYRM. . . PISQKAPAMLADVI
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Template Sequence  . . . . KTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLV. GEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLSNVI
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   156...160.........170.........180......... 190.........200.........210.........220.........230
 
   347..350....... ..360.........370........
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Query Sequence  KKCWIRDPQQR. PTMSQVVQMMYEITGKKDKTS
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Template Sequence  LRATEKDKANRYKTIQEMKDDLSSVLHENRANE
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   246...250.........260.........270........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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