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Job DescriptionQ20933
Confidence100.00%DateFri May 3 21:32:28 BST 2013
Rank277Aligned Residues231
% Identity21%Templatec2i6lB_
PDB info PDB header:transferaseChain: B: PDB Molecule:mitogen-activated protein kinase 6; PDBTitle: crystal structure of human mitogen activated protein kinase2 6 (mapk6)
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   118.120.........130.........140.........150.........160.........170.........180....... ..190..
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Query Sequence  TKVLGEGAFGEVKLGTLKMGSTTVDVAIKVAKLEKVTKEQIKEIITEARLMRGFDHKNVVKCYGVAAIDE. . . . . PLLVV
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Template Sequence  LKPLG. . . NGLVFSAVDNDCDK. . RVAIKKIVLT. . DPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDSVYIV
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   23.... ..30.........40. ........50. ........60.........70.........80.........90.....
 
   193......200.........210.........220.........230.........240.........250.........260.........270..
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Query Sequence  MELVPGGALDKYLQKNSSVQWPEKLDIIAQVAAGLAYIHSKNIIHRDIAARNILYGKGVAKVSDFGLSRVGTEYQMDPSK
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Template Sequence  QEYMETDLANVLEQG. . PLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKI. . . . . . . GDFHLSEGL
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TT
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SGGGTTTT.......




SGGG
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   108.110.........120.. .......130.........140.........150.........160......... 170........
 
   273......280.........290.........300.........310.........320.........330...
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Query Sequence  RVPIRWLSPETIVSFLYTPQTDVFAFSILCWEVIENGAQPYPEMLVVQVHQKVGRDDYRMP. . . . . . . . . . . . . . . . . . .
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Template Sequence  VTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLT. GKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVMTEPHK
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   193......200.........210.........220....... ..230.........240.........250.........260.........270.
 
   334.....340.........350.........360.....
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Query Sequence  . . . . ISQKAPAMLADVIKKCWIRDPQQRPTMSQVVQ
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Template Sequence  PLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS
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   277..280.........290.........300.........310..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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