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Job DescriptionQ20933
Confidence99.97%DateFri May 3 21:32:28 BST 2013
Rank315Aligned Residues178
% Identity17%Templatec3en9B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:o-sialoglycoprotein endopeptidase/protein kinase; PDBTitle: structure of the methanococcus jannaschii kae1-bud32 fusion2 protein
Resolution2.67 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   115....120.........130.........140.........150........ .160.........170.........180........
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Query Sequence  ITMTKVLGEGAFGEVKLGTLKMGSTTVDVAIKVAKLEKVTKEQI. . . . . . KEIITEARLMRGFDHKNVVKCYGVAAIDEP
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Template Sequence  TDMVEVNWIGAEADIKRDSYL. . . . DFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDN
Template Known Secondary structure  GGGS






ST....T


TTS
GGGTT




TTT
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   316...320.........330...... ...340.........350.........360.........370.........380.........390.
 
   189190.........200.........210.........220.........230.........240.........250.........260........
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Query Sequence  LLVVMELVPGGALDKYLQKNSSVQWPEKLDIIAQVAAGLAYIHSKNIIHRDIAARNILYGKGVAKVSDFGLSRVGTEYQM
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Template Sequence  KRIMMSYINGKLAKDVIEDN. . . . . . . . LDIAYKIGEIVGKLHKNDVIHNDLTTSNFIF. DKDLYIIDFGLGKISNLDED
Template Known Secondary structure  T


SGGGTTTT
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S


GGG.SSS


TT



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   409410.........420........ .430.........440.........450......... 460.........470.........
 
   269270.........280.........290.........300.........310
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Query Sequence  DPSKRVPIRWLSPETIVSFLYTPQTDVFAFSILCWEVIENGA
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Template Sequence  KAVDL. . . . IVFKKAVLSTHHEKFDEIWERFLEGYKSVY. DR
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TTT
.TT
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   480.... .....490.........500.........510.... ..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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