Return to main results Retrieve Phyre Job Id

Job DescriptionQ20933
Confidence100.00%DateFri May 3 21:32:28 BST 2013
Rank175Aligned Residues235
% Identity23%Templatec3i6uA_
PDB info PDB header:transferaseChain: A: PDB Molecule:serine/threonine-protein kinase chk2; PDBTitle: structure and activation mechanism of the chk2 dna-damage checkpoint2 kinase
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   113......120.........130.........140.........150.........160.........170.........180.........190..
Predicted Secondary structure 



















Query SS confidence 















































































Query Sequence  ADITMTKVLGEGAFGEVKLGTLKMGSTTVDVAIKVAKLEKVTKEQIKEIITEARLMRGFDHKNVVKCYGVAAIDEPLLVV
Query Conservation          

 
 

 
             



                 
  

  
 
 


             

Alig confidence 


























..















..




























.


Template Conservation    
     

 
 

 

 
     
 .. 



 
         ..    
  

  
 




           . 

Template Sequence  DEYIMSKTLGSGACGEVKLAFERKTCK. . KVAIRIISKRKFAIGL. . NVETEIEILKKLNHPCIIKIKNFFDAEDY. YIV
Template Known Secondary structure  TT
SSSTTT

..GGGGTT

..



TTB



SS.
Template Predicted Secondary structure 









..





..








.
Template SS confidence 















































































   218.220.........230.........240.... .....250.........260 .........270.........280......... 290..
 
   193......200.........210.........220.........230.........240....... ..250.........260........
Predicted Secondary structure 






























....















Query SS confidence 






















































. . . .




















Query Sequence  MELVPGGALDKYLQKNSSVQWPEKLDIIAQVAAGLAYIHSKNIIHRDIAARNILY. . . . GKGVAKVSDFGLSRVGTEYQM
Query Conservation   
    
 
                     
   
  

     
 


  
   ....     

 




        
Alig confidence 






















































....
















....
Template Conservation                                
   
  

     
 
    

           
  


      ....
Template Sequence  LELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG. . . .
Template Known Secondary structure 

TT
BGGGGTSSS



TT


S


GGGSSSSSS



SSTTTS

....
Template Predicted Secondary structure 







































....
Template SS confidence 















































































   301........310.........320.........330.........340.........350.........360.........370......
 
   269270.........280.........290.........300.........310.........320.........330..... ....340.....
Predicted Secondary structure 


































...



Query SS confidence 


































































. . .









Query Sequence  DPSKRVPIRWLSPETIVSFLYTPQTDVFAFSILCWEVIENGAQPYPEMLVVQVHQKVGRDDYRMPIS. . . QKAPAMLADV
Query Conservation           
 


          






  
 

 
 
  
            
          ...      
  
Alig confidence  ........






























.


























...









Template Conservation  ........                 








 



.
  

            
               
     
Template Sequence  . . . . . . . . PTYLAPEVLVAGYNRAVDCWSLGVILFICLS. GYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDL
Template Known Secondary structure  ........
TT

TTTT

TT.SS
SS


SSS

TT




TTS
Template Predicted Secondary structure  ........




















.
























Template SS confidence 















































































   388.390.........400.........410........ .420.........430.........440.........450........
 
   346...350.........360.....
Predicted Secondary structure 






Query SS confidence 



















Query Sequence  IKKCWIRDPQQRPTMSQVVQ
Query Conservation 
  

  

  


   
  
Alig confidence 



















Template Conservation 
  

  

  
 

 
 
 
Template Sequence  VKKLLVVDPKARFTTEEALR
Template Known Secondary structure  S
SSTTTS

Template Predicted Secondary structure 







Template SS confidence 



















   463......470.........480..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D