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Job DescriptionQ20933
Confidence100.00%DateFri May 3 21:32:28 BST 2013
Rank138Aligned Residues229
% Identity25%Templatec3is5E_
PDB info PDB header:transferaseChain: E: PDB Molecule:calcium-dependent protein kinase; PDBTitle: crystal structure of cdpk kinase domain from toxoplasma gondii,2 tgme49_018720
Resolution2.55 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   113......120.........130.........140.........150.........160.........170.........180.........190..
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Query Sequence  ADITMTKVLGEGAFGEVKLGTLKMGSTTVDVAIKVAKLEKVTKEQIKEIITEARLMRGFDHKNVVKCYGVAAIDEPLLVV
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Template Sequence  DLFIFKRKLGSGAFGDVHLVEERSSGL. . ERVIKTINKDR. SQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIV
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   133......140.........150......... 160.........170 .........180.........190.........200.........
 
   193......200....... ..210.........220.........230.........240........ .250.........260....
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Query Sequence  MELVPGGALDKYLQK. . . . NSSVQWPEKLDIIAQVAAGLAYIHSKNIIHRDIAARNILYG. . . . KGVAKVSDFGLSRVGT
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Template Sequence  METCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAE. . .
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   210.........220.........230.........240.........250.........260.........270.........280......
 
   265....270.........280.........290.........300.........310.........320.........330.........340....
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Query Sequence  EYQMDPSKRVPIRWLSPETIVSFLYTPQTDVFAFSILCWEVIENGAQPYPEMLVVQVHQKVGRDDYRMPISQKAPAMLAD
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Template Sequence  . . . . . . . . LFKALYMAPEVFK. RDVTFKCDIWSAGVVMYFLLT. GCLPFTGTSLEEVQQKAT. . . . . . . . YKPLTPQAVD
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   287..290......... 300.........310.........320 .........330........ .340........
 
   345....350.........360.....
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Query Sequence  VIKKCWIRDPQQRPTMSQVVQ
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Template Sequence  LLKQMLTKDPERRPSAAQVLH
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   369370.........380.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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