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Job DescriptionQ20933
Confidence100.00%DateFri May 3 21:32:28 BST 2013
Rank54Aligned Residues259
% Identity26%Templatec3lxkA_
PDB info PDB header:transferaseChain: A: PDB Molecule:tyrosine-protein kinase jak3; PDBTitle: structural and thermodynamic characterization of the tyk2 and jak32 kinase domains in complex with cp-690550 and cmp-6
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   109110.........120.........130..... ....140.........150.........160.........170.........180.....
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Query Sequence  ELNHADITMTKVLGEGAFGEVKLGTLK. . MGSTTVDVAIKVAKLEKVTKEQIKEIITEARLMRGFDHKNVVKCYGVAAI.
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Template Sequence  IFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS. . GPDQQRDFQREIQILKALHSDFIVKYRGVSYGP
Template Known Secondary structure  B

GGGTT
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   816...820.........830.........840.........850.........860 .........870.........880.........890...
 
   186...190.........200...... ...210.........220.........230.........240..... ....250.........260.
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Query Sequence  . DEPLLVVMELVPGGALDKYLQ. KNSSVQWPEKLDIIAQVAAGLAYIHSKNIIHRDIAARNI. LYGKGVAKVSDFGLSR.
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Template Sequence  GRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKL
Template Known Secondary structure  SS


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BGGG

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   894.....900.........910.........920.........930.........940.........950.........960.........970...
 
   262.......270.........280.........290.........300.........310..... ....320.........
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Query Sequence  . . . VGTEYQMDPSKRVPIRWLSPETIVSFLYTPQTDVFAFSILCWEVIENGAQPYPE. . . . . . . . . MLVVQVHQKVGRDD
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Template Sequence  LPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT. YCDKSCSPSAEFLRMMVPALSRLLELLEEG
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   974.....980.........990.........1000.........1010.........1020.. .......1030.........1040.........1050..
 
   330.........340.........350.........360.........370
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Query Sequence  YRMPISQKAPAMLADVIKKCWIRDPQQRPTMSQVVQMMYEI
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Template Sequence  QRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDML
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   1058.1060.........1070.........1080.........1090........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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