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Job DescriptionQ20933
Confidence100.00%DateFri May 3 21:32:28 BST 2013
Rank310Aligned Residues190
% Identity21%Templatec2exeA_
PDB info PDB header:transferaseChain: A: PDB Molecule:dual specificity protein kinase clk3; PDBTitle: crystal structure of the phosphorylated clk3
Resolution2.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   163......170.........180.........190.........200.........210 .........220.........230.........240
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Query Sequence  TEARLMRGFDHKNVVKCYGVAAIDEPLLVVMELVPGGALDKYLQKNSS. . VQWPEKLDIIAQVAAGLAYIHSKNIIHRDI
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Template Sequence  LEINVLKKIKEKFLCVL. . . . . . . . . MSDAFELL. GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDL
Template Known Secondary structure  T


B

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B


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BTTTT



TTT



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   200.........210...... ...220.... .....230.........240.........250.........260.........
 
   241........ 250.........260.........270.........280.........290.........300.....
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Query Sequence  AARNILYGK. . . . . . . . . . . . . . . GVAKVSDFGLSRVGTEYQMDPSKRVPIRWLSPETIVSFLYTPQTDVFAFSILCWEV
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Template Sequence  KPENILFVNSEFETLYNEEKSVKNTSIRVADFGSATFDHEHHTTIVATRH. . YRPPEVILELGWAQPCDVWSIGCILFEY
Template Known Secondary structure 
GGG

B


B



GGG
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SS
S
GG..G

TT


ST
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   285....290.........300.........310.........320.........330.... .....340.........350.........360..
 
   306...310.........320........ .330.........340...
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Query Sequence  IENGAQPYPEMLVVQVHQKVGRD. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . DYRMPISQKAPAMLA
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Template Conservation    .                                                                             
Template Sequence  YR. GFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLF
Template Known Secondary structure  .SS
S


SS




S
GGGTT


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GGGG
S

S
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   368. 370.........380.........390.........400.........410.........420.........430.........440......
 
   344.....350.........360.....
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Query Sequence  DVIKKCWIRDPQQRPTMSQVVQ
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Template Sequence  DLMRRMLEFDPAQRITLAEALL
Template Known Secondary structure  T
S
TTTS

T
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   447..450.........460........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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