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Job DescriptionQ20933
Confidence100.00%DateFri May 3 21:32:28 BST 2013
Rank157Aligned Residues292
% Identity16%Templatec2kulA_
PDB info PDB header:transferaseChain: A: PDB Molecule:serine/threonine-protein kinase vrk1; PDBTitle: solution structure of human vaccinia related kinase 1(vrk1)
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   110.........120.........130......... 140.........150. ........160.........170.......
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Query Sequence  LNHADITMTKVLGEGAFGEVKLGTLKMGST. . . TVDVAIKVAKLE. . . . . . . . . KVTKEQIKEIITEARLMRGFDHKNVV
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Template Sequence  MAKKEWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVP
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   32.......40.........50.........60.........70.........80.........90.........100.........110.
 
   178.180.... .....190.........200........ .210.........220.........230.........240........ .
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Query Sequence  KCYGVAA. . . . IDEPLLVVMELVPGGALDKYLQKN. SSVQWPEKLDIIAQVAAGLAYIHSKNIIHRDIAARNILYG. . . K
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Template Sequence  KYWGSGLHDKNGKSYRFMIMDRF. GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNP
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   112.......120.........130.... .....140.........150.........160.........170.........180.........190
 
   250.........260.........270... ......280.........290.........300.........310........
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Query Sequence  GVAKVSDFGLSRVGTEYQMDPSKR. . . . . . . . VPIRWLSPETIVSFLYTPQTDVFAFSILCWEVIENGAQPYPEMLV. . .
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Template Sequence  DQVYLVDYGLAYRYCPEGVHKEYKEDPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLT. GHLPWEDNLKDPK
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   191........200.........210.........220.........230.........240.........250...... ...260.........
 
   319320.........330.........340.........350.........360.........370.........380.........390..
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Query Sequence  . . . . . . VQVHQKVGRDDYRMPISQKAPAMLADVIKKCWIRDPQQRPTMSQVVQMMYEITGKKDKTSVNKSTGQLRAKMMS
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Template Sequence  YVRDSKIRYRENIASLMDKCFPEKNKPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIGSKDDGKLDLSVVENGGL
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   270.........280.........290.........300.........310.........320.........330.........340.........
 
   393......400...
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Query Sequence  TGPMSDPMRDK
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Template Sequence  KAKTITKKRKK
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   350.........360
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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