Return to main results Retrieve Phyre Job Id

Job DescriptionQ20933
Confidence100.00%DateFri May 3 21:32:28 BST 2013
Rank255Aligned Residues244
% Identity24%Templatec2pk9A_
PDB info PDB header:signaling protein,transferase/cell cycleChain: A: PDB Molecule:cyclin-dependent protein kinase pho85; PDBTitle: structure of the pho85-pho80 cdk-cyclin complex of the2 phosphate-responsive signal transduction pathway
Resolution2.91 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   115....120.........130.........140.........150.........160.........170.........180.........190....
Predicted Secondary structure 



















Query SS confidence 















































































Query Sequence  ITMTKVLGEGAFGEVKLGTLKMGSTTVDVAIKVAKLEKVTKEQIKEIITEARLMRGFDHKNVVKCYGVAAIDEPLLVVME
Query Conservation        

 
 

 
             



                 
  

  
 
 


             

 
Alig confidence 
























..















..























..








Template Conservation 
 
   

 
 

 



       .. 



 
         ..    

 

  
 




      ..      
 
Template Sequence  FKQLEKLGNGTYATVYKGLNKTTGV. . YVALKEVKLSEEGTPS. . TAIREISLMKELKHENIVRLYDVI. . HNKLTLVFE
Template Known Secondary structure 






SS
SSS

..

TT
S
..TT

BTTB

..

Template Predicted Secondary structure 








..


..






..




Template SS confidence 















































































   7..10.........20.........30. ........40....... ..50.........60.........70. ........80
 
   195....200.........210.........220.........230.........240..... ....250.........260.........270...
Predicted Secondary structure 




























.





















Query SS confidence 


















































.



























Query Sequence  LVPGGALDKYLQKNSSVQWPEKLDIIAQVAAGLAYIHSKNIIHRDIAARNI. LYGKGVAKVSDFGLSRVGTEYQMDPSKR
Query Conservation      
 
                     
   
  

     
 


  
 .       

 




             
Alig confidence 


















































.



























Template Conservation        
                         
                                               
Template Sequence  FMDNDLKKYMDSRTRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSE
Template Known Secondary structure 


TT




TT




GGG
TTS



SS
TTS







Template Predicted Secondary structure 











































Template SS confidence 















































































   84.....90.........100.........110.........120.........130.........140.........150.........160...
 
   274.. ...280.........290.........300.........310.........320.....
Predicted Secondary structure 

..




















..........................
Query SS confidence 


. .
















































. . . . . . . . . . . . . . . . . . . . . . . . . .
Query Sequence  VPI. . RWLSPETIVSFLYTPQTDVFAFSILCWEVIENGAQPYPEMLVVQVHQKV. . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation     .. 
 


          






  
 

 
 
  
            
..........................
Alig confidence 


..






























.
















..........................
Template Conservation                        

 


    
   .
  

                                      
Template Sequence  VVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMIT. GKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQ
Template Known Secondary structure 
S

TT

TTGGGT
S


TT.SS
S


SS
S

STT
GGGGG
TT

TT

Template Predicted Secondary structure 

















.



















Template SS confidence 















































































   169170.........180.........190.........200.... .....210.........220.........230.........240.......
 
   326...330.........340.........350.........360.....
Predicted Secondary structure  ......


















Query SS confidence  . . . . . .







































Query Sequence  . . . . . . GRDDYRMPISQKAPAMLADVIKKCWIRDPQQRPTMSQVVQ
Query Conservation  ......                
  

  

  

  


   
  
Alig confidence  ......







































Template Conservation                     
     

   
  

  



 


 
Template Sequence  QRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH
Template Known Secondary structure 





TGGG
SS




SSGGGS

TT
Template Predicted Secondary structure 






















Template SS confidence 













































   248.250.........260.........270.........280.........290...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D