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Job DescriptionQ20933
Confidence100.00%DateFri May 3 21:32:28 BST 2013
Rank294Aligned Residues249
% Identity22%Templatec3ttjA_
PDB info PDB header:transferase/transferase inhibitorChain: A: PDB Molecule:mitogen-activated protein kinase 10; PDBTitle: crystal structure of jnk3 complexed with cc-359, a jnk inhibitor for2 the prevention of ischemia-reperfusion injury
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   101........110.........120.........130.........140.........150.........160.........170.........180
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Query Sequence  NPIGRQSWELNHADITMTKVLGEGAFGEVKLGTLKMGSTTVDVAIKVAKLEKVTKEQIKEIITEARLMRGFDHKNVVKCY
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Template Sequence  YSVEVSTFTV. LKRYQNLKPIGSGAQGIVCAAYDAVLDR. . NVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL
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   4950........ .60.........70.........80...... ...90.........100.........110.........120.....
 
   181.... ....190.........200.........210.........220.........230.........240..... ....250...
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Query Sequence  GVAAI. . . . . . DEPLLVVMELVPGGALDKYLQKNSSVQWPEKLDIIAQVAAGLAYIHSKNIIHRDIAARNI. LYGKGVAK
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Template Sequence  NVFTPQKTLEEFQDVYLVMELMDANLCQVIQMEL. . . DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLK
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   128.130.........140.........150.........160. ........170.........180.........190.........200....
 
   254.....260.........270.........280.........290.........300.........310.........320.....
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Query Sequence  VSDFGLSRVGTEYQMDPSKRVPIRWLSPETIVSFLYTPQTDVFAFSILCWEVIENGAQPYPEMLVVQVHQKV. . . . . . . .
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Template Sequence  ILDFGLAS. . . . . . . . . FMMVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVR. HKILFPGRDYIDQWNKVIEQLGTPC
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   205....210.. .......220.........230.........240......... 250.........260.........270....
 
   326...330.........340.........350.........360.....
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GRDDYRMPISQKAPAMLADVIKKCWIRDPQQRPTMSQVVQ
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Template Sequence  PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ
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   284.....290.........300.........310.........320.........330.........340.........350.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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