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Job DescriptionQ20933
Confidence100.00%DateFri May 3 21:32:28 BST 2013
Rank98Aligned Residues267
% Identity34%Templatec2qobA_
PDB info PDB header:transferaseChain: A: PDB Molecule:ephrin receptor; PDBTitle: human epha3 kinase domain, base structure
Resolution1.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   109110.........120.........130..... ....140.........150.........160.........170.........180.......
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Query Sequence  ELNHADITMTKVLGEGAFGEVKLGTLK. MGSTTVDVAIKVAKLEKVTKEQIKEIITEARLMRGFDHKNVVKCYGVAAIDE
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Template Sequence  ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG. YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSK
Template Known Secondary structure  B

GGG
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TTS


TT.

TT


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   615....620.........630.........640.........650........ .660.........670.........680.........690...
 
   188.190.........200.........210.........220.........230.........240..... ....250.........260......
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Query Sequence  PLLVVMELVPGGALDKYLQKNSSVQWPEKLDIIAQVAAGLAYIHSKNIIHRDIAARNI. LYGKGVAKVSDFGLSRVGTEY
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Template Sequence  PVMIVTEMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSR. . . . .
Template Known Secondary structure  S


TT
BTTTT
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TT
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   694.....700.........710.........720.........730.........740.........750.........760........
 
   267..270.........280.........290.........300.........310.........320.........330.........340......
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Query Sequence  QMDPSKRVPIRWLSPETIVSFLYTPQTDVFAFSILCWEVIENGAQPYPEMLVVQVHQKVGRDDYRMPISQKAPAMLADVI
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Template Sequence  . . . . VLKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY. RLPPPMDCPAALYQLM
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GGGS




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TTTT

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   770.........780.........790.........800.........810.........820........ .830.........840....
 
   347..350.........360.........370.........380......
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Query Sequence  KKCWIRDPQQRPTMSQVVQMMYEITGKKDKTSVNKSTGQL
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Template Sequence  LDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITRPSNL
Template Known Secondary structure  T
SSGGGS

SGGGGGSB


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   858.860.........870.........880.........890.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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