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Job DescriptionQ20933
Confidence100.00%DateFri May 3 21:32:28 BST 2013
Rank251Aligned Residues244
% Identity22%Templatec3enmC_
PDB info PDB header:transferaseChain: C: PDB Molecule:dual specificity mitogen-activated protein kinase kinase 6; PDBTitle: the structure of the map2k mek6 reveals an autoinhibitory dimer
Resolution2.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   110.........120.........130.........140.........150.........160........ .170.........180........
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Query Sequence  LNHADITMTKVLGEGAFGEVKLGTLKMGSTTVDVAIKVAKLEKVTKEQIKEIITEARLM. RGFDHKNVVKCYGVAAIDEP
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Template Sequence  VKADDLEPIXELGRGAYGVVEKXRHVPSGQ. . IXAVKRIRAT. VNSQEQKRLLXDLDISXRTVDCPFTVTFYGALFREGD
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   48.50.........60.........70....... ..80....... ..90.........100.........110.........120....
 
   189190.........200 .........210.........220.........230... ......240..... ....250.........260...
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Query Sequence  LLVVMELVPGGA. . . LDKYLQKNSSVQWPEKLDIIAQVAAGLAYIHSK. NIIHRDIAARNI. LYGKGVAKVSDFGLSRVG
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Template Sequence  VWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGIS. . .
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   125....130.........140.........150.........160.........170.........180.........190.........200.
 
   264.....270.........280........ .290.........300.........310......... 320.........330.........340.
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Query Sequence  TEYQMDPSKRVPIRWLSPETIVSFL. YTPQTDVFAFSILCWEVIENGAQPYPEMLVV. QVHQKVGRDDYRMPISQKAPAM
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Template Sequence  . . . . . GYLVDDVKPYXAPERINPELNQSVKSDIWSLGITXIELAI. LRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAE
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   202.......210.........220.........230.........240. ........250.........260.........270.....
 
   342.......350.........360.....
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Query Sequence  LADVIKKCWIRDPQQRPTMSQVVQ
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Template Sequence  FVDFTSQCLKKNSKERPTYPELXQ
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   287..290.........300.........310
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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