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Job DescriptionQ20933
Confidence99.97%DateFri May 3 21:32:28 BST 2013
Rank314Aligned Residues220
% Identity14%Templatec4gygA_
PDB info PDB header:transferaseChain: A: PDB Molecule:rio2 kinase; PDBTitle: crystal structure of the rio2 kinase from chaetomium thermophilum
Resolution2.48 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   115....120.........130.........140......... 150.........160.........170.........180....
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Query Sequence  ITMTKVLGEGAFGEVKLGTLKMGSTTVDVAIKVAK. . . . . . . . . . LEKVTKEQIKEIITEARLMRGFDHKNVVKCYGVAA
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Template Sequence  YSVGSRIGVGKESDIMIVADEKGK. . . QKVLKIHRLGRISFRTVKRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF
Template Known Secondary structure  S
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   96...100.........110......... 120.........130.........140.........150.........160.........170..
 
   185....190.........200.........210.........220.........230.........240.........250. ..
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Query Sequence  IDEPLLVVMELVPGGALDKYLQKNSSVQWPEKLDIIAQVAAGLAYIHSKNIIHRDIAARNILYGKGV. . . . . . . . . . . AK
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Template Sequence  PVPEPIAQSRHTIVMSLVDALPMRQVSSVPDPASLYADLIALILRLAKHGLIHGDFNEFNILIREEKDAEDPSSITLTPI
Template Known Secondary structure  S


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S
GGG



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   175....180.........190.........200.........210.........220.........230.........240.........250....
 
   254.....260.........270.........280.........290.........300.........310.........320.........330..
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Query Sequence  VSDFGLSRVGTEYQMDPSKRVPIRWLSPETIVSFLYTPQTDVFAFSILCWEVIENGAQPYPEMLVVQVHQKVGRDDYRM.
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Template Sequence  IIDFPQM. . . . . . . . . . . . VSMDHPNAEMYFDR. . . . . . . DVQCIKRFFERRFH. FVSTTPGPFYKDAKKTVGKDGAKRL
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   255....260. ........270..... ....280......... 290.........300.........310....
 
   333......340.........350.......
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Query Sequence  . . . PISQKAPAMLADVIKKCWIRDPQQR
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Template Conservation 
  
           

        
 
Template Sequence  DAALEASGFTKKMAKDLEAAIREQQESR
Template Known Secondary structure  GGTTGGGT

TT
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   315....320.........330.........340..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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