Return to main results Retrieve Phyre Job Id

Job DescriptionQ20933
Confidence100.00%DateFri May 3 21:32:28 BST 2013
Rank237Aligned Residues253
% Identity24%Templatec3zonA_
PDB info PDB header:transferaseChain: A: PDB Molecule:non-receptor tyrosine-protein kinase tyk2; PDBTitle: human tyk2 pseudokinase domain bound to a kinase inhibitor
Resolution2.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   104.....110.........120.........130.........140.........150.........160.........170.........180...
Predicted Secondary structure 





















Query SS confidence 















































































Query Sequence  GRQSWELNHADITMTKVLGEGAFGEVKLGTLKMGSTTVDVAIKVAKLEKVTKEQIKEIITEARLMRGFDHKNVVKCYGVA
Query Conservation                   

 
 

 
             



                 
  

  
 
 


      
Alig confidence 































...












..





























Template Conservation 
     
          

 
 

 

     ...    



 
   ..          
      
 
  
       
Template Sequence  QLSFHRVDQKEITQLSHLGQGTRTNVYEGRLR. . . VELRVVLKVLDPS. . HHDIALAFYETASLMSQVSHTHLAFVHGVC
Template Known Secondary structure 





GGGTT
...


S
..
TT


TTB

Template Predicted Secondary structure 








...





..











Template SS confidence 















































































   578.580.........590.........600......... 610.........620.. .......630.........640.........650..
 
   184.....190.........200..... ....210.........220.........230.........240.........250 .......
Predicted Secondary structure 







.



























.....



Query SS confidence 





















.












































. . . . .






Query Sequence  AIDEPLLVVMELVPGGALDKYL. QKNSSVQWPEKLDIIAQVAAGLAYIHSKNIIHRDIAARNILYGKG. . . . . VAKVSDF
Query Conservation         

 
    
 
    .                 
   
  

     
 


  
      .....  

 

Alig confidence 





















.












































.....






Template Conservation                                                                                  
Template Sequence  VRGPENIMVTEYVEHGPLDVWLRRERGHVPMAWKMVVAQQLASALSYLENKNLVHGNVCGRNILLARLGLAEGTSPFIKL
Template Known Secondary structure  TT

TT
BTTT


TT





SGGG


STT


Template Predicted Secondary structure 

























































Template SS confidence 















































































   678.680.........690.........700.........710.........720.........730.........740.........750.......
 
   258.260.........270.........280.........290.........300.........310.........320.........330.......
Predicted Secondary structure 













































Query SS confidence 















































































Query Sequence  GLSRVGTEYQMDPSKRVPIRWLSPETIVSFLYTPQTDVFAFSILCWEVIENGAQPYPEMLVVQVHQKVGRDDYRMPISQK
Query Conservation 


                 
 


          






  
 

 
 
  
            
            
Alig confidence 


























...












































.....
Template Conservation                         

  ...      



 
  
 

     
                     .....
Template Sequence  SDPGVGLGALSREERVERIPWLAPECL. . . PLSTAMDKWGFGATLLEICFDGEAPLQSRSPSEKEHFYQRQHRLP. . . . .
Template Known Secondary structure 



S
GGGS
TTTTS
GGG
...


TTTTT

TTTTS
TT



.....
Template Predicted Secondary structure 























...















.....
Template SS confidence 















































































   758.760.........770.........780.... .....790.........800.........810.........820.........
 
   338.340.........350.........360.........370
Predicted Secondary structure 








Query SS confidence 
































Query Sequence  APAMLADVIKKCWIRDPQQRPTMSQVVQMMYEI
Query Conservation      
  

  

  

  


   
   
   
Alig confidence  .































Template Conservation  .      

  

  

  


  


  
  
Template Sequence  . EPQLATLTSQCLTYEPTQRPSFRTILRDLTRL
Template Known Secondary structure  .



T
SSGGGS

TT
Template Predicted Secondary structure  .








Template SS confidence 
































   835....840.........850.........860......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D