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Job DescriptionQ20933
Confidence100.00%DateFri May 3 21:32:28 BST 2013
Rank300Aligned Residues229
% Identity28%Templatec2oidA_
PDB info PDB header:transferaseChain: A: PDB Molecule:interleukin-1 receptor-associated kinase 4; PDBTitle: crystal structure of irak4 kinase domain complexed with2 amppnp
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   111........120.........130.........140.........150.........160.........170.........180.........190
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Query Sequence  NHADITMTKVLGEGAFGEVKLGTLKMGSTTVDVAIKVAKLEKVTKEQIKEIITEARLMRGFDHKNVVKCYGVAAIDEPLL
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Template Sequence  DERPISVGGNKGEGGFGVVYKGYV. . . . NNTTVAVK. . . . . . . . . . . . . . . . KEIKVMAKCQHENLVELLGFS. . . . . . C
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GGGTS


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TTB


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   181........190.........200.... .....210.. .......220.........230... .
 
   191........200...... ...210.........220.........230.........240..... ....250.........260......
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Query Sequence  VVMELVPGGALDKYLQ. . . KNSSVQWPEKLDIIAQVAAGLAYIHSKNIIHRDIAARNI. LYGKGVAKVSDFGLSRVGTEY
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Template Sequence  LVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEVM
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BTTGGG




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SGGG
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   260.........270.........280.........290.........300.........310.........320.........330.........
 
   267..270.........280.........290.........300.........310.........320..... ....330...
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Query Sequence  QMDPSKRVPIRWLSPETIVSFLYTPQTDVFAFSILCWEVIENGAQPYPEMLVVQVHQKV. . . . . . . . . . . . . GRDDYRMP
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Template Sequence  RIVGTT. . . . . AYMAPEALRGEITPKSDIYSFGVVLLEIIT. GLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMND
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G.....GG

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SB
TTSSSSBGGGTTSS
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   347..350.. .......360.........370.........380.. .......390.........400.........410.........420
 
   334.....340.........350.........360.........370.
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Query Sequence  ISQKAPAMLADVIKKCWIRDPQQRPTMSQVVQMMYEIT
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Template Sequence  ADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT
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T
SSTTTS

T
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   421........430.........440.........450........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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