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Job DescriptionQ20933
Confidence100.00%DateFri May 3 21:32:28 BST 2013
Rank162Aligned Residues245
% Identity22%Templatec3igoA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calmodulin-domain protein kinase 1; PDBTitle: crystal structure of cryptosporidium parvum cdpk1, cgd3_920
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   113......120.........130.........140.........150.........160.........170.........180.........190..
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Query Sequence  ADITMTKVLGEGAFGEVKLGTLKMGSTTVDVAIKVAKLEKVTKEQIKEIITEARLMRGFDHKNVVKCYGVAAIDEPLLVV
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Template Sequence  ERYNIVCMLGKGSFGEVLKCKDRITQQ. . EYAVKVINKASAK. NKTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV
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   74.....80.........90.........100 .........110... ......120.........130.........140.........150
 
   193......200.........210.........220.........230.........240.........250.........260.........270..
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Query Sequence  MELVPGGALDKYLQKNSSVQWPEKLDIIAQVAAGLAYIHSKNIIHRDIAARNILYGKGVAKVSDFGLSRVGTEYQMDPSK
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Template Sequence  GELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKE. . . . KDCDIKIIDFGLSTCFQ
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   152.......160.........170.........180.........190.........200.........210 .........220.......
 
   273......280.........290.........300.........310.........320.........330..... ....340.........350
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Query Sequence  RVPIRWLSPETIVSFLYTPQTDVFAFSILCWEVIENGAQPYPEMLVVQVHQKVGRDDYRMPIS. . QKAPAMLADVIKKCW
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Template Sequence  QNTTAYYIAPEVLRGTYDEKCDVWSAGVILYILLS. GTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKML
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   228.230.........240.........250.........260.. .......270.........280.........290.........300......
 
   351........360.....
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Query Sequence  IRDPQQRPTMSQVVQ
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Template Sequence  TFHPSLRITATQCLE
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   314.....320........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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