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Job DescriptionQ20933
Confidence100.00%DateFri May 3 21:32:28 BST 2013
Rank252Aligned Residues219
% Identity21%Templatec3famA_
PDB info PDB header:transferaseChain: A: PDB Molecule:carbon catabolite-derepressing protein kinase; PDBTitle: crystal structure of the protein kinase domain of yeast amp-2 activated protein kinase snf1
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   118.120... ......130.........140.........150.........160.........170.........180.........190......
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Query Sequence  TKVLGE. GAFGEVKLGTLKMGSTTVDVAIKVAKLEKVTKEQIKEIITEARLMRGFDHKNVVKCYGVAAIDEPLLVVMELV
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Template Sequence  GAHIGNYQIVKKVKLAYHTTTGQ. . KVALKIINKKVM. . . . QGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA
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   4950.........60.........70. ........80... ......90.........100.........110.........120..
 
   197..200.........210.........220.........230.........240..... ....250.........260.........270.....
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Query Sequence  PGGALDKYLQKNSSVQWPEKLDIIAQVAAGLAYIHSKNIIHRDIAARNI. LYGKGVAKVSDFGLSRVGTEYQMDPSKRVP
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Template Sequence  . GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFG. . . . . . . . . . . . . . . . .
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   136...140.........150.........160.........170.........180.........190.......
 
   276...280.........290.........300.........310.........320.........330.........340.........350.....
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Query Sequence  IRWLSPETIVSFLYTPQTDVFAFSILCWEVIENGAQPYPEMLVVQVHQKVGRDDYRMPISQKAPAMLADVIKKCWIRDPQ
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Template Sequence  . . LSPNYAAPEVISGPEVDVWSCGVILYVMLC. RRLPFDDESIPVLFKNISNG. . VYTLPKFLSPGAAGLIKRMLIVNPL
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   198.200.........210.........220....... ..230.........240....... ..250.........260.........270..
 
   356...360.....
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Query Sequence  QRPTMSQVVQ
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Template Sequence  NRISIHEIMQ
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   293......300..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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