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Job DescriptionQ20933
Confidence100.00%DateFri May 3 21:32:28 BST 2013
Rank90Aligned Residues255
% Identity25%Templatec1mruB_
PDB info PDB header:transferaseChain: B: PDB Molecule:probable serine/threonine-protein kinase pknb; PDBTitle: intracellular ser/thr protein kinase domain of2 mycobacterium tuberculosis pknb.
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   112.......120.........130.........140.........150.... .....160.........170.........180.........
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Query Sequence  HADITMTKVLGEGAFGEVKLGTLKMGSTTVDVAIKVAKLEKVT. KEQIKEIITEARLMRGFDHKNVVKCYGVAAIDEPL.
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Template Sequence  SDRYELGEILGFGGMSEVHLARDLRLHR. . DVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAG
Template Known Secondary structure  TTT
SSTTTT..STTTTSSSST

BTTB


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   8.10.........20.........30..... ....40.........50.........60.........70.........80.....
 
   190.........200.........210.........220.........230.........240..... ....250.........260.....
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Query Sequence  . . . LVVMELVPGGALDKYLQKNSSVQWPEKLDIIAQVAAGLAYIHSKNIIHRDIAARNI. LYGKGVAKVSDFGLSRVGTE
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Template Sequence  PLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIAR. . . .
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   86...90.........100.........110.........120.........130.........140.........150.........160.
 
   266...270.........280.........290.........300.........310.........320.........330... ......340...
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Query Sequence  YQMDPSKRVPIRWLSPETIVSFLYTPQTDVFAFSILCWEVIENGAQPYPEMLVVQVHQKVGRDDYRMP. . ISQKAPAMLA
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Template Sequence  . . . . . . . AITAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT. GEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLD
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   162.......170.........180.........190...... ...200.........210.........220.........230...
 
   344.....350........ .360.........370.........380
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Query Sequence  DVIKKCWIRDPQQRP. TMSQVVQMMYEITGKKDKTSVN
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Template Sequence  AVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAPK
Template Known Secondary structure  T
SSGGGS
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   249250.........260.........270.........280......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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