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Job DescriptionQ20933
Confidence100.00%DateFri May 3 21:32:28 BST 2013
Rank250Aligned Residues239
% Identity24%Templatec4aguC_
PDB info PDB header:transferaseChain: C: PDB Molecule:cyclin-dependent kinase-like 1; PDBTitle: crystal structure of the human cdkl1 kinase domain
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   113......120.........130.........140.........150.........160.........170.........180.........190..
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Query Sequence  ADITMTKVLGEGAFGEVKLGTLKMGSTTVDVAIKVAKLEKVTKEQIKEIITEARLMRGFDHKNVVKCYGVAAIDEPLLVV
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Template Sequence  EKYEKIGKIGEGSYGVVFKCRNRDTGQ. . IVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLV
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   2.......10.........20........ .30.........40.........50.........60.........70.........
 
   193......200.........210.........220.........230.........240..... ....250.........260.........270.
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Query Sequence  MELVPGGALDKYLQKNSSVQWPEKLDIIAQVAAGLAYIHSKNIIHRDIAARNI. LYGKGVAKVSDFGLSRVGTEYQMDPS
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Template Sequence  FEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFAR. . . . . . . . . .
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   80.........90.........100.........110.........120.........130.........140.........
 
   272.......280...... ...290.........300.........310.........320.........330..
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Query Sequence  KRVPIRWLSPETIVS. FLYTPQTDVFAFSILCWEVIENGAQPYPEMLVVQVHQKVGRDDYRM. . . . . . . . . . . . . . . . . .
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Template Sequence  . LLTRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLS. GVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVK
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   150.........160.........170.........180..... ....190.........200.........210.........220.......
 
   333......340.........350.........360.....
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Query Sequence  . . . . . . . . . . . PISQKAPAMLADVIKKCWIRDPQQRPTMSQVVQ
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Template Sequence  IPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH
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   240.........250.........260.........270.........280...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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