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Job DescriptionQ20933
Confidence100.00%DateFri May 3 21:32:28 BST 2013
Rank253Aligned Residues263
% Identity25%Templatec2qkwB_
PDB info PDB header:transferaseChain: B: PDB Molecule:protein kinase; PDBTitle: structural basis for activation of plant immunity by2 bacterial effector protein avrpto
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   104.....110.........120.........130.........140.........150.........160.........170.........180...
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Query Sequence  GRQSWELNHADITMTKVLGEGAFGEVKLGTLKMGSTTVDVAIKVAKLEKVTKEQIKEIITEARLMRGFDHKNVVKCYGVA
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Template Sequence  PLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGA. . . KVALKRRTPESSQGIE. . EFETEIETLSFCRHPHLVSLIGFC
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S








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B
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   30.........40.........50.........60.... .....70.........80 .........90.........100....
 
   184.....190.........200....... ..210.........220.........230.........240..... ....250........
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Query Sequence  AIDEPLLVVMELVPGGALDKYLQK. . . . NSSVQWPEKLDIIAQVAAGLAYIHSKNIIHRDIAARNI. LYGKGVAKVSDFG
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Template Sequence  DERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFG
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TT



TT
BTGGGSSSS


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TT
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T
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   105....110.........120.........130.........140.........150.........160.........170.........180....
 
   259260.........270.... .....280.........290.........300.........310.........320........
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Query Sequence  LSRVGTEYQMDPSKRV. PIRWLSPETIVSFLYTPQTDVFAFSILCWEVIENGAQPYPEMLVVQVHQKVGRD. . . . . . . . .
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Template Sequence  ISKKGTELDQTHLVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLC. ARSAIVQSLPREMVNLAEWAVESHNNGQL
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   185....190.........200.........210.........220.........230.... .....240.........250.........260...
 
   329330.........340.........350.........360.........370..
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Query Sequence  . . . . . . DYRMPISQKAPAMLADVIKKCWIRDPQQRPTMSQVVQMMYEITG
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Template Sequence  EQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALR
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SSSSSS
TT
S
T
SSGGGS

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   266...270.........280.........290.........300.........310.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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