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Job DescriptionQ20933
Confidence100.00%DateFri May 3 21:32:28 BST 2013
Rank24Aligned Residues267
% Identity30%Templatec2ivsA_
PDB info PDB header:transferaseChain: A: PDB Molecule:proto-oncogene tyrosine-protein kinase receptor PDBTitle: crystal structure of non-phosphorylated ret tyrosine kinase2 domain
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   106...110.........120.........130.... .....140.........150.........160.........170.........180..
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Query Sequence  QSWELNHADITMTKVLGEGAFGEVKLGTL. . . KMGSTTVDVAIKVAKLEKVTKEQIKEIITEARLMRGFDHKNVVKCYGV
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Template Sequence  PKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLK. ENASPSELRDLLSEFNVLKQVNHPHVIKLYGA
Template Known Secondary structure  TTTB

GGG
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   715....720.........730.........740.........750.........760. ........770.........780.........790...
 
   183......190.........200......... 210.........220.........230.........240..... ....250...
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Query Sequence  AAIDEPLLVVMELVPGGALDKYLQKNS. . . . . . . . SVQWPEKLDIIAQVAAGLAYIHSKNIIHRDIAARNI. LYGKGVAK
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Template Sequence  CSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLRALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMK
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SGGGTTT
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   794.....800.........810.........820.........830.........840.........850.........860.........870...
 
   254.....260..... ....270.........280.........290.........300.........310.........320.........330
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Query Sequence  VSDFGLSRVGTE. . . YQMDPSKRVPIRWLSPETIVSFLYTPQTDVFAFSILCWEVIENGAQPYPEMLVVQVHQKVGRDDY
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Template Sequence  ISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLL. KTGH
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   890.........900.........910.........920.........930.........940.........950.........960.... ....
 
   331........340.........350.........360.........370....
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Query Sequence  RMPISQKAPAMLADVIKKCWIRDPQQRPTMSQVVQMMYEITGKK
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Template Sequence  RMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVKR
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TT

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   969970.........980.........990.........1000.........1010..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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