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Job DescriptionQ20933
Confidence100.00%DateFri May 3 21:32:28 BST 2013
Rank105Aligned Residues239
% Identity26%Templatec3fbvL_
PDB info PDB header:transferase, hydrolaseChain: L: PDB Molecule:serine/threonine-protein kinase/endoribonuclease ire1; PDBTitle: crystal structure of the oligomer formed by the kinase-ribonuclease2 domain of ire1
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   115....120........ .130.........140.........150.........160.........170. ........180.........190..
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Query Sequence  ITMTKVLGEGAFGE. VKLGTLKMGSTTVDVAIKVAKLEKVTKEQIKEIITEARLMRGF. DHKNVVKCYGVAAIDEPLLVV
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Template Sequence  VVSEKILGYGSSGTVVFQGSFQGR. . . . PVAVKRMLIDF. . . . . CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIA
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   674.....680.........690....... ..700........ .710.........720.........730.........740....
 
   193......200.........210..... ....220.........230.........240.........250.
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Query Sequence  MELVPGGALDKYLQKNSSVQWPE. . . . . . . KLDIIAQVAAGLAYIHSKNIIHRDIAARNILYGKGV. . . . . . . . . . . . . .
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Template Sequence  LELCN. LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLR
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   745.... 750.........760.........770.........780.........790.........800.........810.........820...
 
   252.......260....... ..270.........280...... ...290.........300.........310.........320......
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Query Sequence  AKVSDFGLSRVGTEYQ. . MDPSKRVPIRWLSPETIVS. . . FLYTPQTDVFAFSILCWEVIENGAQPYPEMLVVQVHQKVG
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Template Sequence  ILISDFGLCKKLDSGQFRNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPF. . GDKYSRESNII
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SGGGGG

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   824.....830.........840.........850.........860.........870.........880.........890 .........900.
 
   327..330.. .......340.........350.........360.....
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Query Sequence  RDDYRM. . . . . PISQKAPAMLADVIKKCWIRDPQQRPTMSQVVQ
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Template Sequence  RGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR
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   933......940.........950.........960.........970......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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