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Job DescriptionQ20933
Confidence100.00%DateFri May 3 21:32:28 BST 2013
Rank261Aligned Residues243
% Identity26%Templatec4accB_
PDB info PDB header:transferaseChain: B: PDB Molecule:glycogen synthase kinase-3 beta; PDBTitle: gsk3b in complex with inhibitor
Resolution2.21 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   114.....120.........130.........140.........150.........160.........170.........180........
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Query Sequence  DITMTKVLGEGAFGEVKLGTLKMGSTTVDVAIKVAKLEKVTKEQIKEIITEARLMRGFDHKNVVKCYGVAAIDEP. . . . .
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Template Sequence  SYTDTKVIGNGSFGVVYQAKLCDSGE. . LVAIKKVLQDK. . . . . . RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEV
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SSTTT

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   55....60.........70.........80 .........90. ........100.........110.........120......
 
   189190.........200...... ...210.........220.........230.........240..... ....250.........260..
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Query Sequence  . LLVVMELVPGGALDKYLQ. . . KNSSVQWPEKLDIIAQVAAGLAYIHSKNIIHRDIAARNI. . LYGKGVAKVSDFGLSRV
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Template Sequence  YLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ
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   127..130.........140.........150.........160.........170.........180.........190.........200......
 
   263......270.........280........ .290.........300.........310.........320.........330....
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Query Sequence  GTEYQMDPSKRVPIRWLSPETIVSFL. YTPQTDVFAFSILCWEVIENGAQPYPEMLVVQVHQKVGRDDYRMPI. . . . . . .
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Template Sequence  LVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLL. GQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN
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   207..210.........220.........230.........240.........250.. .......260.........270.........280.....
 
   335....340.........350.........360.....
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Query Sequence  . . . . . . . . . . . . . . . . . . . . SQKAPAMLADVIKKCWIRDPQQRPTMSQVVQ
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Template Sequence  PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA
Template Known Secondary structure  GGGSS









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TTS
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   286...290.........300.........310.........320.........330......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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