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Job DescriptionQ20933
Confidence100.00%DateFri May 3 21:32:28 BST 2013
Rank22Aligned Residues268
% Identity34%Templatec3g0eA_
PDB info PDB header:transferaseChain: A: PDB Molecule:mast/stem cell growth factor receptor; PDBTitle: kit kinase domain in complex with sunitinib
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   106...110.........120.........130..... ....140.........150.........160.........170. ........180.
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Query Sequence  QSWELNHADITMTKVLGEGAFGEVKLGTLK. . . MGSTTVDVAIKVAKLEKVTKEQIKEIITEARLMRGF. DHKNVVKCYG
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Template Sequence  HKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK. PSAHLTEREALMSELKVLSYLGNHMNIVNLLG
Template Known Secondary structure  GGGB

GGG
SSSSSSTT

.TT




TTB

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   580.........590.........600.........610.........620...... ...630.........640.........650........
 
   182.......190.........200..... ....210.........220.........230.........240...
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Query Sequence  VAAIDEPLLVVMELVPGGALDKYL. . . . . . . . . . . . . . . . . . QKNSSVQWPEKLDIIAQVAAGLAYIHSKNIIHRDIAAR
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Template Sequence  ACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAAR
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SSSS


TT
BGGGGS
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SGG
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   659660.........670.........680.........690.........700.........710.........720.........730........
 
   244.....250 .........260...... ...270.........280.........290.........300.........310.........
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Query Sequence  NILYGKG. VAKVSDFGLSRVGTEY. . . QMDPSKRVPIRWLSPETIVSFLYTPQTDVFAFSILCWEVIENGAQPYPEMLVV
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Template Sequence  NILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD
Template Known Secondary structure  GTTT


GGG

GGG
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GGGS
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S
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   797..800.........810.........820.........830.........840.........850.........860.........870......
 
   320.........330.........340.........350.........360.........370....
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Query Sequence  QVHQKVGRDDYRMPISQKAPAMLADVIKKCWIRDPQQRPTMSQVVQMMYEITGKK
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Template Sequence  SKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISES
Template Known Secondary structure  TT





TT

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SSGGGS


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   877..880.........890.........900.........910.........920.........930.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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