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Job DescriptionQ20933
Confidence100.00%DateFri May 3 21:32:28 BST 2013
Rank283Aligned Residues225
% Identity24%Templatec3kn5B_
PDB info PDB header:transferaseChain: B: PDB Molecule:ribosomal protein s6 kinase alpha-5; PDBTitle: crystal structure of the c-terminal kinase domain of msk1 in complex2 with amp-pnp
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   112...... .120.........130.........140.........150.........160.........170. ........180.......
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Query Sequence  HADITMT. . . KVLGEGAFGEVKLGTLKMGSTTVDVAIKVAKLEKVTKEQIKEIITEARLMRGF. DHKNVVKCYGVAAIDE
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Template Sequence  YQHYDLDLKDKPLGEGSFSICRKCVHKKSNQ. . AFAVKIISKRM. . . . . EANTQKEITALKLCEGHPNIVKLHEVFHDQL
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   420.........430.........440.........450 .........460. ........470.........480.........490..
 
   188.190.........200.........210.........220.........230.........240.........250.........260.......
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Query Sequence  PLLVVMELVPGGALDKYLQKNSSVQWPEKLDIIAQVAAGLAYIHSKNIIHRDIAARNILYGKGVAKVSDFGLSRVGTEYQ
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Template Sequence  HTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDLEIKIIDFGFARLKP. . .
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   493......500.........510.........520.........530.........540.........550.........560.........
 
   268.270.........280.........290.........300.........310....... ..320.........330 ........
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Query Sequence  MDPSKRVPIRWLSPETIVSFLYTPQTDVFAFSILCWEVIENGAQPYPEML. . . . . . . VVQVHQKVGRDDY. . RMPISQKA
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Template Sequence  . . . . . . . . . . . . . . . . . . PNGYDESCDLWSLGVILYTMLS. GQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNV
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   574.....580.........590..... ....600.........610.........620.........630....
 
   339340.........350.........360.....
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Query Sequence  PAMLADVIKKCWIRDPQQRPTMSQVVQ
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Template Sequence  SQEAKDLIQGLLTVDPNKRLKMSGLRY
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   657..660.........670.........680...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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