 |
Job Description | Q20933 | Confidence | 100.00% | Date | Fri May 3 21:32:28 BST 2013 |
Rank | 232 | Aligned Residues | 261 |
% Identity | 18% | Template | c3tacA_ |
PDB info |
PDB header:transferase/protein binding | Chain: A: PDB Molecule:peripheral plasma membrane protein cask; |
PDBTitle: crystal structure of the liprin-alpha/cask complex
|
Resolution | 2.20 Å |
|
 |
  |   |
102 | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | |
|
|
. | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|  |  | . | . | . |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | I | G | R | Q | S | W | E | L | N | H | A | D | I | T | M | T | K | V | L | G | E | G | A | F | G | E | V | K | L | G | T | L | K | M | G | S | T | T | V | D | V | A | I | K | V | A | K | L | E | . |
. |
. |
K | V | T | K | E | Q | I | K | E | I | I | T | E | A | R | L | M | R | G | F | D | H | K | N | V | V | K |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |   |   |   |   | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |
|   |
|   |
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |
|
|   |
|   |
|
|   |
|
|   |
|   |   |   |   |   |   |   | . | . |   |
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |
|   |
|   |
|
|
|   |
Template Sequence |   |
P | S | M | A | D | D | D | V | L | F | E | D | V | Y | E | L | C | E | V | I | G | K | G | P | F | S | V | V | R | R | C | I | N | R | E | T | G | Q | . |
. |
Q | F | A | V | K | I | V | D | V | A | K | F | T | S | S | P | G | L | S | T | E | D | L | K | R | E | A | S | I | C | H | M | L | K | H | P | H | I | V | E |
Template Known Secondary structure |   |
|
|
|
|
|
| S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| S | S |  |  |  |  |  |  |  |  | T | T | T |
|
| . | . |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| T | T | B |
|
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
| . | . |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
Phyre2 is part of Genome3D |
|