Job Description Q9TYT3 Confidence 98.32% Date Sat Apr 13 13:01:24 BST 2013 Rank 126 Aligned Residues 121 % Identity 10% Template c4dx94_ PDB info PDB header:protein binding Chain: 4: PDB Molecule:integrin beta-1-binding protein 1; PDBTitle: icap1 in complex with integrin beta 1 cytoplasmic tail Resolution 2.99 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	A	T	Y	L	G	S	V	P	V	V	E	S	I	N	V	M	V	S	E	M	R	V	Q	V	V	S	E	C	I	Q	H	V	A	A	T	V	G	V	T	A	A	R	E	I	N	P	V	V	S	R	V	I	G	E	V	K	K	E	N	F	P	V	D	I	N	I	S	S	K	M	I	K	I	I	K	Q	S	R
Query Conservation
Alig confidence													.							.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.							.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	R	I	K	Y	V	G	A	I	E	L	.	G	L	E	G	P	L	.	.	.	.	.	.	.	.	.	.	D	L	I	N	Y	I	D	V	A	Q	Q	D	G	K	L	P	F	.	.	.	.	.	.	.	.	.	.	.	.	V	P	P	E	E	E	F	I	X	G	V	S	K	Y	G	I	K	V	S	T	S	D	D
Template Known Secondary structure													.				S			.	.	.	.	.	.	.	.	.	.									T	T	T	T	T	S	S		S	.	.	.	.	.	.	.	.	.	.	.	.	S			S									S	S
Template Predicted Secondary structure													.							.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		63	.	.	.	.	.	.	70	.	.	.		.	.	.	.	.	.											80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.													.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.		.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		L	I	Q	R	H	P	F	S	F	F	S	F	G	A	Q	G	Q	K	G	T	.	D	T	E	L	M	F	G	Y	I	A	K	N	K	D	G	T	D	R	R	C	H	V	V	F	I	E	D	V	H	K	L	I	D	V	L	T	T	A	I	N	V	N	T	F	D	A
Query Conservation																						.
Alig confidence																						.																											.														.
Template Conservation																																																	.														.
Template Sequence		V	L	H	R	H	A	L	Y	L	I	I	R	X	V	C	Y	D	D	G	L	G	A	G	K	S	L	L	A	L	K	T	T	D	A	S	N	E	E	Y	S	L	W	V	Y	Q	C	N	.	S	L	E	Q	A	Q	A	I	C	K	V	L	S	.	T	A	F	D	S
Template Known Secondary structure								T	T	T	B									S	S	S	S									B			S	S												S	.	S													.
Template Predicted Secondary structure																																																	.														.
Template SS confidence
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.		.	190	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D