Job Description Q9TYT3 Confidence 99.96% Date Sat Apr 13 13:01:24 BST 2013 Rank 10 Aligned Residues 129 % Identity 20% Template c3so6A_ PDB info PDB header:protein binding/protein transport Chain: A: PDB Molecule:ldl receptor adaptor protein; PDBTitle: crystal structure of the ldl receptor tail in complex with autosomal2 recessive hypercholesterolemia ptb domain Resolution 1.37 Å Model Dimensions (Å) X: Y: Z:

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	S	L	S	A	T	Y	L	G	S	V	P	V	V	E	S	I	N	V	M	V	S	E	M	R	V	Q	V	V	S	E	C	I	Q	H	V	A	A	T	V	G	V	T	A	A	R	E	I	N	P	V	V	S	R	V	I	G	E	V	K	K	E	N	F	P	V	D	I	N	I	S	S	K	M	I	K	I	I	K
Query Conservation
Alig confidence																					.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	M	V	F	S	L	K	Y	L	G	M	T	L	V	E	R	P	K	G	.	.	.	.	.	.	.	E	E	L	S	A	A	A	V	K	R	I	V	A	T	A	K	A	S	G	K	K	L	Q	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	T	L	K	V	S	P	R	G	I	I	L	T	D
Template Known Secondary structure																S	S	S			.	.	.	.	.	.	.																		T		S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T
Template Predicted Secondary structure																					.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.								.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.																	.	.	.	90	.	.	.	.	.	.	.	.	.	100
				96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	Q	S	R	L	I	Q	R	H	P	F	S	F	F	S	F	G	A	Q	G	Q	K	G	T	D	T	E	L	M	F	G	Y	I	A	K	N	K	D	G	T	D	R	R	C	H	V	V	F	I	E	D	V	H	K	L	I	D	V	L	T	T	A	I	N	V	N	T	F	D	A	Q	A	N	A	S	T	S	N
Query Conservation		.	.
Alig confidence		.	.																								.	.	.																												.										.
Template Conservation																											.	.	.																												.										.
Template Sequence		S	L	T	S	Q	L	I	E	N	V	S	I	Y	R	I	S	Y	C	T	A	D	K	M	H	D	.	.	.	K	V	F	A	Y	I	A	Q	S	Q	Q	N	E	S	L	E	C	H	A	F	L	C	T	K	R	K	V	.	A	Q	A	V	T	L	T	V	A	.	Q	A	F	K	V	A	F	E	F	W	Q	V	S
Template Known Secondary structure		T	T	T									G	G	G								S	S	S	T	.	.	.	T									S	S	S	S										S	S				.										.												T	T
Template Predicted Secondary structure																											.	.	.																												.										.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.				.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.		.	.	.	.	.	.	.	160	.		.	.	.	.	.	.	.	.	170	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D