Job Description Q9TYT3 Confidence 99.83% Date Sat Apr 13 13:01:24 BST 2013 Rank 109 Aligned Residues 88 % Identity 16% Template c3gxxB_ PDB info PDB header:transcription Chain: B: PDB Molecule:transcription elongation factor spt6; PDBTitle: structure of the sh2 domain of the candida glabrata2 transcription elongation factor spt6, crystal form b Resolution 2.40 Å

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		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.			.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.					.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.																																							.	.	.	.
Query SS confidence																									.	.																																							.	.	.	.
Query Sequence		E	D	V	V	G	K	V	W	Y	H	G	N	L	S	R	E	D	A	Q	A	L	L	K	.	.	T	E	G	D	F	L	V	R	Q	S	D	H	T	P	G	K	Y	V	L	S	G	R	T	A	E	N	E	H	K	H	L	I	L	L	D	N	H	N	.	.	.	.	R	V	R	T	R	D	R	T	F	S	N	I	S
Query Conservation																									.	.																																							.	.	.	.
Alig confidence												.													.	.																																							.	.	.	.
Template Conservation												.
Template Sequence		H	R	V	I	N	H	P	Y	Y	F	.	P	F	N	G	K	Q	A	E	D	Y	L	R	S	K	E	R	G	D	F	V	I	R	Q	S	S	R	G	D	D	H	L	A	I	T	W	K	L	D	K	D	L	F	Q	H	V	D	I	Q	E	X	E	K	E	X	G	K	V	L	V	V	E	G	Q	R	Y	H	D	L	D
Template Known Secondary structure						T		T	T	B		.												T	T	S		T	T									S	T	T											T	T																				S	S	S				S	S
Template Predicted Secondary structure												.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	I	D	Y	H	V	N	N	G	M	A	V	R	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	I	I	V	E	Y	L	Q	N	K	I	R	L	L	N
Template Known Secondary structure														T
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D