24/04/2013 05:15:34 : INFO  : Run start: Wed Apr 24 05:15:34 BST 2013
24/04/2013 05:15:37 : INFO  : Initialised job
24/04/2013 05:15:37 : INFO  : Initialised job:
Sequence
>batch____
MLNVEPSFAEELRSSGVSLSATYLGSVPVVESINVMVSEMRVQVVSECIQHVAATVGVTA
AREINPVVSRVIGEVKKENFPVDINISSKMIKIIKQSRLIQRHPFSFFSFGAQGQKGTDT
ELMFGYIAKNKDGTDRRCHVVFIEDVHKLIDVLTTAINVNTFDAQANASTSNDGFTVPAP
PMRHRSSLHRQSFVSNCRAPTVTEDVVGKVWYHGNLSREDAQALLKTEGDFLVRQSDHTP
GKYVLSGRTAENEHKHLILLDNHNRVRTRDRTFSNISELIDYHVNNGMAVRSEGRDRETS
LNLIRPVPCPGSDDIE

24/04/2013 05:15:38 : INFO  : Checked sequence
24/04/2013 05:15:38 : INFO  : Finding homologues with PSI-BLAST
24/04/2013 05:15:38 : INFO  : PSI-BLAST 3 iterations
24/04/2013 05:21:23 : INFO  : PSI-BLAST 5 iterations
24/04/2013 05:23:16 : INFO  : Finished PSI-BLAST
24/04/2013 05:23:16 : INFO  : Running Buildali to generate a3m file
24/04/2013 05:52:20 : INFO  : Converting to HMM
24/04/2013 05:52:21 : INFO  : Calibrating HMM
24/04/2013 05:52:27 : INFO  : Searching HMM database
24/04/2013 06:05:11 : INFO  : Finished buildali
24/04/2013 06:05:11 : INFO  : Predicting secondary structure
24/04/2013 06:05:12 : INFO  : Predicted secondary structure (PSI-Pred)
24/04/2013 06:05:12 : INFO  : Predicting Disordered regions
24/04/2013 06:05:12 : INFO  : Predicted Disorder (Disopred)
24/04/2013 06:05:12 : INFO  : Running memsat_svm check
24/04/2013 06:08:06 : INFO  : Globular protein
24/04/2013 06:08:06 : INFO  : Predicted Transmembrane (memsat_svm) ID '2b16cb7caa7c6c32'
24/04/2013 06:08:06 : INFO  : Initialising fold library search
24/04/2013 06:08:06 : INFO  : Initialised search input
24/04/2013 06:08:07 : INFO  : Building Ensemble models
24/04/2013 06:08:07 : INFO  : Building hh.d1oy2a_.model.1.pdb
24/04/2013 06:08:08 : INFO  : Building hh.c3suzA_.model.2.pdb
24/04/2013 06:08:08 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/2b16cb7caa7c6c32/hh.c3suzA_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/2b16cb7caa7c6c32/c3suzA_.2.pdb
24/04/2013 06:08:08 : INFO  : Building hh.c3sv1C_.model.3.pdb
24/04/2013 06:08:08 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/2b16cb7caa7c6c32/hh.c3sv1C_.model.3.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/2b16cb7caa7c6c32/c3sv1C_.3.pdb
24/04/2013 06:08:09 : INFO  : Building hh.c2gsbA_.model.4.pdb
24/04/2013 06:08:09 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/2b16cb7caa7c6c32/hh.c2gsbA_.model.4.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/2b16cb7caa7c6c32/c2gsbA_.14.pdb
24/04/2013 06:08:10 : INFO  : Building hh.c2dcrA_.model.5.pdb
24/04/2013 06:08:10 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/2b16cb7caa7c6c32/hh.c2dcrA_.model.5.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/2b16cb7caa7c6c32/c2dcrA_.15.pdb
24/04/2013 06:08:10 : INFO  : Building hh.c2hdxB_.model.6.pdb
24/04/2013 06:08:11 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/2b16cb7caa7c6c32/hh.c2hdxB_.model.6.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/2b16cb7caa7c6c32/c2hdxB_.16.pdb
24/04/2013 06:08:11 : INFO  : Building hh.c2kk6A_.model.7.pdb
24/04/2013 06:08:12 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/2b16cb7caa7c6c32/hh.c2kk6A_.model.7.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/2b16cb7caa7c6c32/c2kk6A_.19.pdb
24/04/2013 06:08:12 : INFO  : Building hh.d1mila_.model.8.pdb
24/04/2013 06:08:12 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/2b16cb7caa7c6c32/hh.d1mila_.model.8.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/2b16cb7caa7c6c32/d1mila_.22.pdb
24/04/2013 06:08:12 : INFO  : Building d1oy2a_.1.pdb
24/04/2013 06:08:13 : INFO  : Building c3suzA_.2.pdb
24/04/2013 06:08:13 : INFO  : Building c3sv1C_.3.pdb
24/04/2013 06:08:14 : INFO  : Building d1p3ra_.4.pdb
24/04/2013 06:08:15 : INFO  : Building c3d8dA_.5.pdb
24/04/2013 06:08:15 : INFO  : Building c2m38A_.6.pdb
24/04/2013 06:08:16 : INFO  : Building d1wj1a_.7.pdb
24/04/2013 06:08:16 : INFO  : Building d1ntva_.8.pdb
24/04/2013 06:08:17 : INFO  : Building d1aqca_.9.pdb
24/04/2013 06:08:18 : INFO  : Building c3so6A_.10.pdb
24/04/2013 06:08:18 : INFO  : Building d2dkqa1.11.pdb
24/04/2013 06:08:18 : INFO  : Building c2yszA_.12.pdb
24/04/2013 06:08:19 : INFO  : Building c2elaB_.13.pdb
24/04/2013 06:08:20 : INFO  : Building c2gsbA_.14.pdb
24/04/2013 06:08:21 : INFO  : Building c2dcrA_.15.pdb
24/04/2013 06:08:21 : INFO  : Building c2hdxB_.16.pdb
24/04/2013 06:08:21 : INFO  : Building c3dxeC_.17.pdb
24/04/2013 06:08:22 : INFO  : Building c2yt1A_.18.pdb
24/04/2013 06:08:22 : INFO  : Building c2kk6A_.19.pdb
24/04/2013 06:08:23 : INFO  : Building d1ddma_.20.pdb
24/04/2013 06:08:29 : INFO  : Finished HH model building
24/04/2013 06:08:29 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
24/04/2013 06:08:36 : INFO  : html domain output complete ID '2b16cb7caa7c6c32'
24/04/2013 07:23:37 : INFO  : Run end  : Wed Apr 24 07:23:37 BST 2013
