Job Description Q9U2Z5 Confidence 99.78% Date Fri May 3 21:23:33 BST 2013 Rank 53 Aligned Residues 100 % Identity 35% Template c4gmrA_ PDB info PDB header:de novo protein Chain: A: PDB Molecule:or266 de novo protein; PDBTitle: crystal structure of engineered protein. northeast structural genomics2 consortium target or266. Resolution 2.38 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	L	P	N	P	L	H	E	A	A	R	R	G	N	M	D	M	L	A	E	C	L	R	E	R	V	S	V	N	S	L	D	K	S	G	A	T	P	L	Y	W	A	S	H	G	G	H	A	P	A	V	D	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	L	G	K	R	L	I	E	A	A	E	N	G	N	K	D	R	V	K	D	L	L	E	N	G	A	D	V	N	A	S	D	S	D	G	K	T	P	L	H	L	A	A	E	N	G	H	K	E	V	V	K	L	L	L	S	Q	G	A	D	P	N	A	K	D	S	D	G	K	T	P	L	H	L	A	A	E	N	G	H
Template Known Secondary structure														T											T	T			T	T				T	T	S										T	T											T	T			T	T				T	T	S										T	T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
																																								132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	L	K	D	P	K	V	A	V	S	V	Q	N	K	L	G	D	T	P	L	H	A	A	A	Y	K	G	H	V	E	C	V	R	L	L	L	A	S	S	A	N	P
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	E	V	V	K	L	L	L	S	Q	G	A	D	P	N	A	K	D	S	D	G	K	T	P	L	H	L	A	A	E	N	G	H	K	E	V	V	K	L	L	L	S	Q	G	A	D	P	N	T	S	D	S	D	G	R	T	P	L	D	L	A	R	E	H	G	N	E	E	V	V	K	L	L	E	K	Q	G	G	W	L
Template Known Secondary structure											T	T			T	T				T	T	S											T											T	T			T	T				T	T	S										T	T											T	T
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		174	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	V	R	N	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	H	H	H	H
Template Known Secondary structure			S	S
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D