Return to main results Retrieve Phyre Job Id

Job DescriptionQ9U2Z5
Confidence99.86%DateFri May 3 21:23:33 BST 2013
Rank42Aligned Residues122
% Identity19%Templatec3lvrE_
PDB info PDB header:protein transportChain: E: PDB Molecule:arf-gap with sh3 domain, ank repeat and ph domain- PDBTitle: the crystal structure of asap3 in complex with arf6 in transition2 state soaked with calcium
Resolution3.38 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   84.....90.........100......... 110.........120..... ....130.........140.........150....
Predicted Secondary structure 










......















...

























Query SS confidence 

























. . . . . .















. . .




























Query Sequence  LHEAARRGNMDMLAECLRERVSVNSL. . . . . . DKSGATPLYWASHGGH. . . APAVDTLLKDPKVAVSVQNKLGDTPLHAA
Query Conservation 
  
        
  

  


 
  ......
  
 
 
  
     ...      
              
 
 

 
Alig confidence 

























......















...









.







.








Template Conservation 
  

   

  

  
  
 
        
        

 
        
  
  

  .

 

   . 
 
 

 
Template Sequence  LWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQN. GGHLDAKA. DGNTALHYA
Template Known Secondary structure  T
TT

TTS

SSS

S
T

TTT.T

TT


.



Template Predicted Secondary structure 

























.







.



Template SS confidence 















































































   551........560.........570.........580.........590.........600.........610. ........ 620........
 
   155....160.........170.........180.........190.........200.......
Predicted Secondary structure 



























Query SS confidence 




















































Query Sequence  AYKGHVECVRLLLASSANPFVRNQDQKLPSDVTKDADIAALLDKAMKEDRVNE
Query Conservation 
  
    
  

  


 
  
  
 


 

                    
Alig confidence 




















































Template Conservation 
  
    
 


  

        
 
 
  
          

    



Template Sequence  ALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQANKE
Template Known Secondary structure  TT
T



S


TT


TT
TTT



Template Predicted Secondary structure 























Template SS confidence 




















































   630.........640.........650.........660.........670.........680..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D