Job Description Q9U2Z5 Confidence 99.96% Date Fri May 3 21:23:33 BST 2013 Rank 3 Aligned Residues 179 % Identity 49% Template c3ehrB_ PDB info PDB header:signaling protein Chain: B: PDB Molecule:osteoclast-stimulating factor 1; PDBTitle: crystal structure of human osteoclast stimulating factor Resolution 1.95 Å Model Dimensions (Å) X:55.240 Y:62.173 Z:31.720

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	V	K	V	Y	R	A	L	Y	D	F	Q	A	R	S	A	Q	E	L	T	F	S	E	G	D	L	M	Y	V	S	D	E	Q	P	N	K	D	W	F	Q	A	S	I	G	G	K	K	G	L	V	P	A	N	Y	V	I	S	E	N	V	E	E	L	P	N	P	L	H	E	A	A	R	R	G	N	M	D	M	L
Query Conservation
Alig confidence																												.																																.
Template Conservation																												.																																.
Template Sequence		G	Q	V	K	V	F	R	A	L	Y	T	F	E	P	R	T	P	D	E	L	Y	I	E	E	G	D	.	I	I	Y	I	T	D	X	S	D	T	N	W	W	K	G	T	S	K	G	R	T	G	L	I	P	S	N	Y	V	A	E	.	Q	A	E	S	I	D	N	P	L	H	E	A	A	K	R	G	N	L	S	W	L
Template Known Secondary structure										S	S		B			S	S	T	T	B			B		T	T		.									S	S	S							T	T													.						S										T
Template Predicted Secondary structure																												.																																.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.		.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	C	L	R	E	R	V	S	V	N	S	L	D	K	S	G	A	T	P	L	Y	W	A	S	H	G	G	H	A	P	A	V	D	T	L	L	K	D	P	K	V	A	V	S	V	Q	N	K	L	G	D	T	P	L	H	A	A	A	Y	K	G	H	V	E	C	V	R	L	L	L	A	S	S	A	N	P	F	V	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	E	C	L	D	N	R	V	G	V	N	G	L	D	K	A	G	S	T	A	L	Y	W	A	C	H	G	G	H	K	D	I	V	E	X	L	F	T	Q	P	N	I	E	L	N	Q	Q	N	K	L	G	D	T	A	L	H	A	A	A	W	K	G	Y	A	D	I	V	Q	L	L	L	A	K	G	A	R	T	D	L	R
Template Known Secondary structure							T	T			T	T				T	T	S										T	T									T	T	S	T	T								T	T	S											T												T			S
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	Q	D	Q	K	L	P	S	D	V	T	K	D	A	D	I	A	A	L	L	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	I	E	K	K	L	A	F	D	X	A	T	N	A	A	C	A	S	L	L	K
Template Known Secondary structure			T	T	S									S
Template Predicted Secondary structure
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D