Job Description Q9U2Z5 Confidence 99.92% Date Fri May 3 21:23:33 BST 2013 Rank 24 Aligned Residues 144 % Identity 22% Template c3deoA_ PDB info PDB header:protein transport, membrane protein Chain: A: PDB Molecule:signal recognition particle 43 kda protein; PDBTitle: structural basis for specific substrate recognition by the2 chloroplast signal recognition particle protein cpsrp43 Resolution 1.50 Å

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		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.				.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure																							.	.	.
Query SS confidence																							.	.	.
Query Sequence		M	Y	V	S	D	E	Q	P	N	K	D	W	F	Q	A	S	I	G	G	K	K	.	.	.	G	L	V	P	A	N	Y	V	I	S	E	N	V	E	E	L	P	N	P	L	H	E	A	A	R	R	G	N	M	D	M	L	A	E	C	L	R	E	R	V	S	V	N	S	L	D	K	S	G	A	T	P	L	Y	W	A
Query Conservation																							.	.	.
Alig confidence																							.	.	.																																						.
Template Conservation																																																															.
Template Sequence		I	I	G	S	R	T	A	G	E	G	A	M	E	Y	L	I	E	W	K	D	G	H	S	P	S	W	V	P	S	S	Y	I	A	A	D	V	V	S	E	Y	E	T	P	W	W	T	A	A	R	K	A	D	E	Q	A	L	S	Q	L	L	E	.	D	R	D	V	D	A	V	D	E	N	G	R	T	A	L	L	F	V
Template Known Secondary structure									T	T	T									T	T									G	G	G	S																		T	T									T	T	.	T	S		T	T				T	T	S
Template Predicted Secondary structure																																																															.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	H	G	G	H	A	P	A	V	D	T	L	L	K	D	P	K	V	A	V	S	V	Q	N	K	L	G	D	T	P	L	H	A	A	A	Y	K	G	H	V	E	C	V	R	L	L	L	A	S	S	A	N	P	F	V	R	N	Q	D	Q	K	L	P	S	D	V	T	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	G	L	G	S	D	K	C	V	R	L	L	A	E	A	G	A	D	L	D	H	R	D	M	R	G	G	L	T	A	L	H	M	A	A	G	Y	V	R	P	E	V	V	E	A	L	V	E	L	G	A	D	I	E	V	E	D	E	R	G	L	T	A	L	E	L	A	R
Template Known Secondary structure					T											T	T			T	T				S	S	S	S										T	T												T			T	T				T	T	S
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D