 |
| Job Description | Q9U2Z5 | | Confidence | 91.28% | Date | Fri May 3 21:23:33 BST 2013 |
| Rank | 79 | Aligned Residues | 71 |
| % Identity | 31% | Template | c2yt6A_ |
| PDB info |
PDB header:cell cycle | Chain: A: PDB Molecule:adult male urinary bladder cdna, riken full- |
PDBTitle: solution structure of the sh3_1 domain of yamaguchi sarcoma2 viral (v-yes) oncogene homolog 1
|
| Resolution | UNK |
|
 |
|   |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | |
. | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . |
| Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  | . |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
S | S | A | R | P | M | A | P | P | P | P | A | P | K | P | G | R | V | K | V | Y | R | A | L | Y | D | F | Q | A | R | S | A | Q | E | L | T | F | S | E | G | D | L | M | Y | V | S | D | E | Q | P | N | K | D | W | F | . |
Q | A | S | I | G | G | K | K | G | L | V | P | A | N | Y | V |
| Query Conservation |   |
|   |   |   |
|   |   |
|
|   |   |
|   |   |   |
|   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   | . |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|   |
|   |   |   |   |
|
|
|   |   |   |
|
|   |
|   |
|
|   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |
|   |   |
|   |
|
|
|   |
|
|
| Template Sequence |   |
S | S | F | S | V | V | S | S | S | Y | P | T | G | L | T | G | G | V | T | I | F | V | A | L | Y | D | Y | E | A | R | T | T | E | D | L | S | F | K | K | G | E | R | F | Q | I | I | N | N | T | E | G | D | W | W | E | A | R | S | I | A | T | G | K | S | G | Y | I | P | S | N | Y | V |
| Template Known Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
| S | S |
|
| S | S |
|
|  |  |  |  | S | S |
|
|
|
| S | S | T | T | S |
|
|
|
| T | T |
|  |  |  |  |  |  |
| S |
| T | T |
|  |  |  |  |  | S | S | S |
|
|  |  |  |  |
| T | T | T |  |
| Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
Phyre2 is part of Genome3D |
|