60 c2rfaA_ Probab=99.76   E-value=1.4e-19  Score=113.26  Aligned_columns=125  Identities=20%

Q ss_pred             CCHHHHHCCCHHHHHHHHHHHH-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC---------
Q ss_conf             1011210121018999999998-688988868888701122222222222222222222222211001242---------
Q batch____        80 LPNPLHEAARRGNMDMLAECLR-ERVSVNSLDKSGATPLYWASHGGHAPAVDTLLKDPKVAVSVQNKLGDT---------  149 (220)
Q Consensus        80 ~~~~l~~a~~~~~~~~v~~LL~-~Gad~n~~d~~G~T~L~~A~~~~~~~~~~~l~~~~~~~~~~~~~~g~T---------  149 (220)
                      +.||||+|+..|+.++|++||. +|+|+|.+|..|+||||+|+..++...+..++................         
T Consensus         2 ~eTpLh~A~~~g~~~~v~~LL~~~gadin~~d~~G~TpLh~A~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (222)
T c2rfaA_           2 WESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIA   81 (222)
T ss_dssp             TTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHH
T ss_pred             CCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             73778999980999999999996686355679887899999996200222222222222222222222222222222222


Q ss_pred             ------------------------------------------------------------------------------CC
Q ss_conf             ------------------------------------------------------------------------------00
Q batch____       150 ------------------------------------------------------------------------------PL  151 (220)
Q Consensus       150 ------------------------------------------------------------------------------~L  151 (220)
                                                                                                    ..
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (222)
T c2rfaA_          82 VINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILI  161 (222)
T ss_dssp             HHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEC
T ss_conf             22222222221013686112234555432234531117871011222222222222222222222222222222100000


Q ss_pred             HHHHHHCCCCCCHHHHHHCCCCC------CCCCCCCCHHHHHCCCCHHHHHHHHHHCCC
Q ss_conf             00000011221001444258986------637833688899618146999999987389
Q batch____       152 HAAAYKGHVECVRLLLASSANPF------VRNQDQKLPSDVTKDADIAALLDKAMKEDR  204 (220)
Q Consensus       152 h~Aa~~g~~~~v~~Ll~~gad~n------~~d~~G~TpL~lA~~~~~~~~~~~~~~~~~  204 (220)
                      .............+++..+++++      .+|.+|+||||+|+..++.+++++|++.|+
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~LL~~GA  220 (222)
T c2rfaA_         162 LQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKRK  220 (222)
T ss_dssp             TCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCC
T ss_conf             25862222100122320276565454224688975798999998099999999997898


