Job Description Q9U2Z5 Confidence 99.76% Date Fri May 3 21:23:33 BST 2013 Rank 60 Aligned Residues 125 % Identity 20% Template c2rfaA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:transient receptor potential cation channel subfamily v PDBTitle: crystal structure of the mouse trpv6 ankyrin repeat domain Resolution 1.70 Å

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		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.																																																	.	.	.	.	.	.	.	.	.
Query SS confidence																								.																																																	.	.	.	.	.	.	.	.	.
Query Sequence		L	P	N	P	L	H	E	A	A	R	R	G	N	M	D	M	L	A	E	C	L	R	.	E	R	V	S	V	N	S	L	D	K	S	G	A	T	P	L	Y	W	A	S	H	G	G	H	A	P	A	V	D	T	L	L	K	D	P	K	V	A	V	S	V	Q	N	K	L	G	D	T	.	.	.	.	.	.	.	.	.
Query Conservation																								.																																																	.	.	.	.	.	.	.	.	.
Alig confidence																								.																																																	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		W	E	S	P	L	L	L	A	A	K	E	N	D	V	Q	A	L	S	K	L	L	K	F	E	G	C	E	V	H	Q	R	G	A	M	G	E	T	A	L	H	I	A	A	L	Y	D	N	L	E	A	A	M	V	L	M	E	A	A	P	E	L	V	F	E	P	M	T	S	E	L	Y	E	G	Q	T	A	L	H	I	A
Template Known Secondary structure		T	T									T	T										T	T	T		S		T	T				T	T	S										T	T													G	G	G	G	G					S	T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
																																																																																150	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	I	N	Q	N	V	N	L	V	R	A	L	L	A	R	G	A	S	V	S	A	R	A	T	G	S	V	F	H	Y	R	P	H	N	L	I	Y	Y	G	E	H	P	L	S	F	A	A	C	V	G	S	E	E	I	V	R	L	L	I	E	H	G	A	D	I	R	A	Q	D	S	L	G	N	T	V	L	H	I	L	I
Template Known Secondary structure				T	T											T	T			T	T					S	G	G	G	S			T	T		S					S	S									T											T	T			T	T				T	T	S
Template Predicted Secondary structure
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.							.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.
Query Sequence		H	A	A	A	Y	K	G	H	V	E	C	V	R	L	L	L	A	S	S	A	N	P	F	.	.	.	.	.	.	V	R	N	Q	D	Q	K	L	P	S	D	V	T	K	D	A	D	I	A	A	L	L	D	K	A	M	K	E	D	R
Query Conservation																									.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.
Template Conservation
Template Sequence		L	Q	P	N	K	T	F	A	C	Q	M	Y	N	L	L	L	S	Y	D	G	G	D	H	L	K	S	L	E	L	V	P	N	N	Q	G	L	T	P	F	K	L	A	G	V	E	G	N	I	V	M	F	Q	H	L	M	Q	K	R	K
Template Known Secondary structure		T		S															T	T		S		S	S			G	G	G				T	T	S											T
Template Predicted Secondary structure
Template SS confidence
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D