Job Description Q9U2Z5 Confidence 99.77% Date Fri May 3 21:23:33 BST 2013 Rank 57 Aligned Residues 122 % Identity 34% Template c2jabC_ PDB info PDB header:de novo protein Chain: C: PDB Molecule:h10-2-g3; PDBTitle: a designed ankyrin repeat protein evolved to picomolar2 affinity to her2 Resolution 1.70 Å

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		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	P	N	P	L	H	E	A	A	R	R	G	N	M	D	M	L	A	E	C	L	R	E	R	V	S	V	N	S	L	D	K	S	G	A	T	P	L	Y	W	A	S	H	G	G	H	A	P	A	V	D	T	L	L	K	D	P	K	V	A	V	S	V	Q	N	K	L	G	D	T	P	L	H	A	A	A	Y	K	G
Query Conservation
Alig confidence																																																											.
Template Conservation																																																											.
Template Sequence		D	L	G	K	K	L	L	E	A	A	R	A	G	Q	D	D	E	V	R	I	L	M	A	N	G	A	D	V	N	A	K	D	E	Y	G	L	T	P	L	Y	L	A	T	A	H	G	H	L	E	I	V	E	V	L	L	K	N	.	G	A	D	V	N	A	V	D	A	I	G	F	T	P	L	H	L	A	A	F	I	G
Template Known Secondary structure														T											T	T			T	T				T	T	S											T											T	.	T			T	T				T	T												T
Template Predicted Secondary structure																																																											.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	V	E	C	V	R	L	L	L	A	S	S	A	N	P	F	V	R	N	Q	D	Q	K	L	P	S	D	V	T	K	D	A	D	I	A	A	L	L	D	K	A	M	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	L	E	I	A	E	V	L	L	K	H	G	A	D	V	N	A	Q	D	K	F	G	K	T	A	F	D	I	S	I	G	N	G	N	E	D	L	A	E	I	L	Q	K
Template Known Secondary structure												T	T			T	T				T	T	S										T	T
Template Predicted Secondary structure
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D