Job Description Q9U2Z5 Confidence 99.88% Date Fri May 3 21:23:33 BST 2013 Rank 35 Aligned Residues 189 % Identity 17% Template c2f37B_ PDB info PDB header:membrane protein Chain: B: PDB Molecule:transient receptor potential cation channel PDBTitle: crystal structure of the ankyrin repeat domain of human2 trpv2 Resolution 1.70 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.								.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	P	G	R	V	K	V	Y	R	A	L	Y	D	F	Q	A	R	S	A	Q	E	L	T	F	.	.	.	.	.	.	.	S	E	G	D	L	M	Y	V	S	D	E	Q	P	N	K	D	W	F	Q	A	S	I	G	G	K	K	G	L	V	P	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																										.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	F	D	R	D	R	L	F	N	A	V	S	R	G	V	P	E	D	L	A	G	L	P	E	Y	L	S	K	T	S	K	Y	L	T	D	S	E	Y	T	E	G	S	T	G	K	T	C	L	X	K	A	V	L	N	L	K	D	G	V	N	A	C	I	L	P	L	L	Q	I	D	R	D	S	G	N	P	Q	P	L	V
Template Known Secondary structure															T		G	G	G	G	T	T									T			T	T	S	G	G	G	S	B	T	T	T	T	B									T		B	T	T	B		T	T												T		S	S		G	G
Template Predicted Secondary structure
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.														.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	Y	V	I	S	E	N	V	E	E	L	P	N	P	L	H	E	A	A	R	R	G	N	M	D	M	L	A	E	C	L	R	E	R	V	S	V	N	S	L	D	K	S	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	T	P	L	Y	W	A	S	H	G	G	H	A	P	A	V	D	T	L	L	K	D	P
Query Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																													.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	A	Q	C	T	D	D	Y	Y	R	G	H	S	A	L	H	I	A	I	E	K	R	S	L	Q	C	V	K	L	L	V	E	N	G	A	N	V	H	A	R	A	C	G	R	F	F	Q	K	G	Q	G	T	C	F	Y	F	G	E	L	P	L	S	L	A	A	C	T	K	Q	W	D	V	V	S	Y	L	L	E	N	P
Template Known Secondary structure		G		B			S	T	T	T	T	T		B								T	T											T	T			T	T					S	G	G	G		T	T	S	S	S	S			S		S	S								T	T												S
Template Predicted Secondary structure
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		137	.	.	140	.	.																			.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	V	A	V	S	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	N	K	L	G	D	T	P	L	H	A	A	A	Y	K	G	H	V	E	C	V	R	L	L	L	A	S	S	A	N	P	F	V	R	N	Q	D	Q	K	L	P	S	D	V	T	K	D	A	D	I	A	A	L	L	D	K
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	Q	P	A	S	L	Q	A	T	D	S	Q	G	N	T	V	L	H	A	L	V	X	I	S	D	N	S	A	E	N	I	A	L	V	T	S	X	Y	D	G	L	L	Q	A	G	A	R	L	C	P	T	V	Q	L	E	D	I	R	N	L	Q	D	L	T	P	L	K	L	A	A	K	E	G	K	I	E	I	F	R	H
Template Known Secondary structure		S					T	T				T	T	S													S																							S	T	T			G	G	G				T	T	S										T	T
Template Predicted Secondary structure
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
		199	200	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	M	K	E	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	L	Q	R	E
Template Known Secondary structure						T
Template Predicted Secondary structure
Template SS confidence
		313	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D