Job Description Q9U2Z5 Confidence 95.18% Date Fri May 3 21:23:33 BST 2013 Rank 72 Aligned Residues 71 % Identity 21% Template c1mv3A_ PDB info PDB header:endocytosis/exocytosis Chain: A: PDB Molecule:myc box dependent interacting protein 1; PDBTitle: nmr structure of the tumor suppressor bin1: alternative2 splicing in melanoma and interaction with c-myc Resolution UNK Model Dimensions (Å) X: Y: Z:

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.					.	50	.	.	.	.	.	.	.	.											.	60	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.											.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.											.	.	.	.	.	.	.	.	.	.
Query Sequence		S	S	A	R	P	M	A	P	P	P	P	A	P	K	P	G	R	V	K	V	Y	R	A	L	Y	D	F	Q	A	R	S	A	Q	E	L	T	F	S	E	G	D	L	M	Y	V	S	D	.	.	.	.	E	Q	P	N	K	D	W	F	Q	A	.	.	.	.	.	.	.	.	.	.	S	I	G	G	K	K	G	L	V
Query Conservation																																																	.	.	.	.											.	.	.	.	.	.	.	.	.	.
Alig confidence																																																	.	.	.	.											.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	V	E	G	G	S	G	A	G	R	L	D	L	P	P	G	F	M	F	K	V	Q	A	Q	H	D	Y	T	A	T	D	T	D	E	L	Q	L	K	A	G	D	V	V	L	V	I	P	F	Q	N	P	E	E	Q	D	E	G	W	L	M	G	V	K	E	S	D	W	N	Q	H	K	K	L	E	K	C	R	G	V	F
Template Known Secondary structure												S	S			T	T								S	S		B				S	T	T				B		S	S									S		G	G	G	S		T	T												T	G	G	G	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.
		68	.	70	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	N	Y	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	E	N	F	T
Template Known Secondary structure			S	T	T
Template Predicted Secondary structure
Template SS confidence
		474	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D