 |
| Job Description | Q9U2Z5 | | Confidence | 99.88% | Date | Fri May 3 21:23:33 BST 2013 |
| Rank | 34 | Aligned Residues | 131 |
| % Identity | 23% | Template | c1dcqA_ |
| PDB info |
PDB header:metal binding protein | Chain: A: PDB Molecule:pyk2-associated protein beta; |
PDBTitle: crystal structure of the arf-gap domain and ankyrin repeats2 of papbeta.
|
| Resolution | 2.10 Å |
|
 |
|   |   |
82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | |
|
|
|
|
|
. | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | |
|
|
. | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
N | P | L | H | E | A | A | R | R | G | N | M | D | M | L | A | E | C | L | R | E | R | V | S | V | N | . |
. |
. |
. |
. |
. |
S | L | D | K | S | G | A | T | P | L | Y | W | A | S | H | G | . |
. |
. |
G | H | A | P | A | V | D | T | L | L | K | D | P | K | V | A | V | S | V | Q | N | K | L | G | D | T | P | L | H |
| Query Conservation |   |
  |   |
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |
|
|
|   |
| . | . | . | . | . | . |   |   |
|   |   |
|   |
|   |
|   |   |
|   |   |   | . | . | . |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |
|   |   |
|
|   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   | . |
|   |   |   |   |   |   |
|   |   |
|   |
|   |
|
|
| Template Sequence |   |
H | S | L | C | E | A | V | K | T | R | D | I | F | G | L | L | Q | A | Y | A | D | G | V | D | L | T | E | K | I | P | L | A | N | G | H | E | P | D | E | T | A | L | H | L | A | V | R | S | V | D | R | T | S | L | H | I | V | D | F | L | V | Q | N | . |
S | G | N | L | D | K | Q | T | G | K | G | S | T | A | L | H |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |  |  | T | T |
|
| T | T | S | B |
|
|
| S | S |
| S | S | T | T |
| B |  |  |  |  |  |  |  |  |
|
| T | T | T |  |  |  |  |  |  |  |  |  |  | . |
| S |
| T | T |
|
|
| T | T |
|
|
|  |  |  |
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | . |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
376 | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | |
. | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . |
|   |
|   |   |
153 | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | |
|
. | . | . | . | . | . | . | . | . | 210 | . | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  | . | . |  |
|
|
|
|
|  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
A | A | A | Y | K | G | H | V | E | C | V | R | L | L | L | A | S | S | A | N | P | F | V | R | N | Q | D | Q | K | L | P | S | D | V | T | K | D | A | D | I | A | A | L | L | D | K | A | M | . |
. |
K | E | D | R | V | N | E | E | E | Y | A | E | Y |
| Query Conservation |   |
  |
|
|   |   |
|   |   |   |   |
|   |   |
|
|   |   |
|
|
|   |
|   |   |
|   |   |
|   |
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |
|   |   |   |
|   |   |   |   |
|   |   |
|
|   |   |
|
|
|   |   |   |   |
|   |   |
|   |
|   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
| Template Sequence |   |
Y | C | C | L | T | D | N | A | E | C | L | K | L | L | L | R | G | K | A | S | I | E | I | A | N | E | S | G | E | T | P | L | D | I | A | K | R | L | K | H | E | H | C | E | E | L | L | T | Q | A | L | S | G | R | F | N | S | H | V | H | V | E | Y |
| Template Known Secondary structure |   |
 |  |  |  | T | T |
|  |  |  |  |  |  |  |  |  | T | T |
|
| T | T |
|
|
| T | T | S |
|
|  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
| S | S |
|
|
|
|
|
| Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
455 | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
Phyre2 is part of Genome3D |
|